Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1114 111 6e-19 seq988 95.1 5e-14 >seq1114 Length=1476442 Score = 111 bits (122), Expect = 6e-19 Identities = 273/411 (66%), Gaps = 5/411 (1%) Strand=Plus/Plus Query 451196 AAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATT 451255 |||||| | | || || | || || || || | ||||| ||| |||| || ||| | Sbjct 1394379 AAGCCCAAAGTGCAGGTTGACTACAAGGGAGAGGCAAAAACCTTTACTCCCGAGGAAGTC 1394438 Query 451256 TCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTT 451315 || || |||||||| |||||||| || || || || | | | || || || Sbjct 1394439 TCGTCCATGGTTCTAGTCAAAATGAAGGAGACCGCCGAGGCCTTTCTGGGAACTTCATGC 1394498 Query 451316 ACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAA 451375 | || || ||||| ||||| |||||||| ||||| || || || || || || || Sbjct 1394499 AAGGACGCCGTAATCACTGTCCCCGCTTACTTCAACGACAGTCAGCGTCAGGCCACCAAG 1394558 Query 451376 GATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCT 451435 ||||| ||| || || || | || || ||||| || || || ||||| || || || Sbjct 1394559 GATGCTGGAGCCATCGCCGGCCTCAACGTCCTTCGCATCATCAACGAACCCACCGCTGCA 1394618 Query 451436 GCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA-GAAGaaaaaaaTATTTTAGTATT 451494 || | || || || || ||| || ||| ||| | |||| || || || | || Sbjct 1394619 GCCATCGCCTACGG-CTTGGACAAG---AAGGGACATGGAGAACGCAACGTTCTAATCTT 1394674 Query 451495 TGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGA 451554 ||| | || || |||||| ||| || | | | ||||||||||| | || || Sbjct 1394675 CGATCTCGGAGGTGGAACTTTCGATGTCTCCATCTTAACCATTGAAGATGGCATCTTCGA 1394734 Query 451555 AGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 ||| ||| | || |||||| || ||||| |||||||| ||| | ||||| Sbjct 1394735 AGTCAAGTCCACTGCTGGTGACACCCATCTCGGAGGTGAGGATTTCGATAA 1394785 >seq988 Length=203328 Score = 95.1 bits (104), Expect = 5e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 391048 TAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCAT 391107 ||||| | |||||||| ||||| || || |||||||| || || || || || ||| | | Sbjct 72453 TAATGCAGATTTTCGTCAAAACCCTCACGGGTAAAACGATCACCCTCGAGGTCGAAGCCT 72394 Query 391108 CTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATC 391167 | || | ||| ||| | | || || |||||||| ||||||||||| |||||||| | Sbjct 72393 CCGACACCATCGAAAATGTGAAGGCCAAGATTCAAGACAAGGAAGGAATCCCTCCTGACC 72334 Query 391168 AACAACGTTTAATTTTCTCAGGGAA 391192 | |||||| | || ||| | || || Sbjct 72333 AGCAACGTCTCATCTTCGCCGGTAA 72309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975678859700696