Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq31 107 2e-18 >seq31 Length=5916 Score = 107 bits (118), Expect = 2e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 31100 AAAGAAAAGGATTTGATAGGTATACCATGGATGTTAGCATTTGCATTAAGGGCAGACGGA 31159 ||||| || || |||| || || || |||||| | || || || | | || ||||| Sbjct 4990 AAAGATAAAGACCTGATCGGCATTCCGTGGATGCTGGCCTTCGCCCTGCGTGCGGACGGC 5049 Query 31160 TGGTATCTACGACAAGATATCATATGGCATAAACCTAACCCTATGCCAGAGTCAGTGCGA 31219 |||||| |||| || || |||||||||||||| || ||||| ||||| ||| ||||| Sbjct 5050 TGGTATTTACGGCAGGACATCATATGGCATAAGCCGAACCCAATGCCGGAGAGTGTGCGC 5109 Query 31220 GATAGATGCACCAAGTCACATGAGTATTTGTTTTTACTAAGCAA 31263 ||| | ||||| || | ||||||||| | || || || ||||| Sbjct 5110 GATCGCTGCACGAAAGCCCATGAGTATATTTTCTTGCTTAGCAA 5153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579201490870080