Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq31 100 3e-16 >seq31 Length=5916 Score = 100 bits (110), Expect = 3e-16 Identities = 115/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 45638 AAAGAGAAAGACCTTATTGGTATTCCTTGGTTGTTAGCGTTTGCATTACGCAAAGATGGG 45697 ||||| |||||||| || || ||||| ||| || | || || || | || || || Sbjct 4990 AAAGATAAAGACCTGATCGGCATTCCGTGGATGCTGGCCTTCGCCCTGCGTGCGGACGGC 5049 Query 45698 TGGTATCTTAGGCAAGATATTATTTGGCATAAACCTAATCCAATGCCAGAAAGTGTAAAA 45757 |||||| | |||| || || || |||||||| || || |||||||| || ||||| Sbjct 5050 TGGTATTTACGGCAGGACATCATATGGCATAAGCCGAACCCAATGCCGGAGAGTGTGCGC 5109 Query 45758 GATAGATGCACAAAAGCACATGAATATATTTTCTT 45792 ||| | ||||| ||||| ||||| ||||||||||| Sbjct 5110 GATCGCTGCACGAAAGCCCATGAGTATATTTTCTT 5144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564430579277760