Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq31 113 5e-20 >seq31 Length=5916 Score = 113 bits (124), Expect = 5e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 43811 AAAGAGAAAGATTTGATTGGCATTCCTTGGATGTTGGCGTTTGCATTAAGGGCAGATGGA 43870 ||||| ||||| |||| |||||||| |||||| |||| || || | | || || || Sbjct 4990 AAAGATAAAGACCTGATCGGCATTCCGTGGATGCTGGCCTTCGCCCTGCGTGCGGACGGC 5049 Query 43871 TGGTATCTAAGACAGGATATTATTTGGAATAAACCTAATCCTATGCCAGAAAGTGTGAGA 43930 |||||| || | ||||| || || ||| |||| || || || ||||| || |||||| | Sbjct 5050 TGGTATTTACGGCAGGACATCATATGGCATAAGCCGAACCCAATGCCGGAGAGTGTGCGC 5109 Query 43931 GATAGATGTACAAAATCACATGAATATATTTTCCTGCTCAGTAAGAGTCAGAACTATTAT 43990 ||| | || || ||| | ||||| ||||||||| |||| || || | | |||||| Sbjct 5110 GATCGCTGCACGAAAGCCCATGAGTATATTTTCTTGCTTAGCAAATCGCCGCGTTATTAT 5169 Query 43991 TTTGA 43995 ||||| Sbjct 5170 TTTGA 5174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563649794522880