Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq31 96.9 4e-15 >seq31 Length=5916 Score = 96.9 bits (106), Expect = 4e-15 Identities = 115/155 (74%), Gaps = 1/155 (1%) Strand=Plus/Plus Query 39096 AAAGAAAAGGATCTCATAGGTATTCCATGGATGTTCGCATTTGCAATGAGAGCAGACGGA 39155 ||||| || || || || || ||||| |||||| | || || || || | || ||||| Sbjct 4990 AAAGATAAAGACCTGATCGGCATTCCGTGGATGCTGGCCTTCGCCCTGCGTGCGGACGGC 5049 Query 39156 TGGTATTTAAGACAAGATATTATATGGCATAAACCTAATCCAATGCCAGAGTCAGTTAAA 39215 ||||||||| | || || || ||||||||||| || || |||||||| ||| || Sbjct 5050 TGGTATTTACGGCAGGACATCATATGGCATAAGCCGAACCCAATGCCGGAGAGTGTGCGC 5109 Query 39216 GATAGATGTACTAAATCACATGAGTATATCTTTCT 39250 ||| | || || ||| | ||||||||||| ||||| Sbjct 5110 GATCGCTGCACGAAAGCCCATGAGTATAT-TTTCT 5143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582836619892800