Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq31 111 2e-19 >seq31 Length=5916 Score = 111 bits (122), Expect = 2e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 81839 GGTTCCTTGATTGCTTCGTTGTCATAATAATACTTTTTATTTTTACTGAGCAAGAATATA 81898 |||||||||| || ||| |||| ||||||| ||| || |||||||| ||| Sbjct 5195 GGTTCCTTGACGGCGTCGCGGTCAAAATAATAACGCGGCGATTTGCTAAGCAAGAAAATA 5136 Query 81899 TGCTCATGTGATTTAGTGCATCTGTCCTTAACAGACTCAGGCATAGGATTTGGTTTATGC 81958 | |||||| | ||| ||||| | || ||| ||| ||||| || || || |||||| Sbjct 5135 TACTCATGGGCTTTCGTGCAGCGATCGCGCACACTCTCCGGCATTGGGTTCGGCTTATGC 5076 Query 81959 CATATGATATCCTGACGTAGATACCATCCATCTGCCCTCAATGCAAATGCTAACATCCAT 82018 |||||||| ||||| |||| |||||| || || || | || || || || | |||||| Sbjct 5075 CATATGATGTCCTGCCGTAAATACCAGCCGTCCGCACGCAGGGCGAAGGCCAGCATCCAC 5016 Query 82019 GGTATACCTATCAAATCCTTTTCTTT 82044 || || || |||| || || ||||| Sbjct 5015 GGAATGCCGATCAGGTCTTTATCTTT 4990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578987095056240