Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq1419 96.9 5e-15 >seq1419 Length=601844 Score = 96.9 bits (106), Expect = 5e-15 Identities = 122/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| || | || || |||| ||||| || ||||| || || || || | || Sbjct 537975 AATGCAAATCTTCGTCAAGACGCTGACCGGAAAGACGATTACCTTGGAGGTTGAGGGATC 538034 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 || | || |||||||| ||| || |||||||| || ||||| || ||||| || Sbjct 538035 CGACACCATCGAGAACGTGAAGGCTAAGATCCAAGATAAGGAGGGCATTCCCCCAGACCA 538094 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTT 155989 || ||||||| | |||||| ||||||||||| ||| | | ||||| Sbjct 538095 GCAGCGATTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACTTT 538142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731857710199200