Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_021348.1 Length=156558 Score E Sequences producing significant alignments: (Bits) Value seq988 107 2e-18 >seq988 Length=203328 Score = 107 bits (118), Expect = 2e-18 Identities = 200/291 (69%), Gaps = 7/291 (2%) Strand=Plus/Minus Query 131276 TTCGGCGGGACCGACTGCGCGTTGCCGTTGGTCTGGGCCAAGGAGACCAAG--GCCGAGT 131333 |||||| | |||||||||||| |||| || ||||||||| | ||| ||| |||| | Sbjct 199313 TTCGGCAGTACCGACTGCGCGCAGCCGATGCTCTGGGCCACGCAGAAGAAGAAGCCG--T 199256 Query 131334 TCGACACGTTCCAGATCTACACCGACAACGAGACCTGGGCGGGCAACATCCACGTCGACC 131393 ||||| ||||| ||| |||||||||||| |||||| || | | ||| | Sbjct 199255 TCGACGCGTTCATCGTCTTCACCGACAACGACACCTGGCACGGAGAAGTGCACCCGTTCG 199196 Query 131394 AGGCGCTGGAACAGTACCGCCAGTCCTCGGGTATCGATGCTCGGGTCGAGATCGTGT--- 131450 ||||| | | |||||||| ||||| ||| ||||| | | | | ||||||| Sbjct 199195 AGGCGATTAAGGAGTACCGCGAGTCCATGGGCATCGAGGATGCGCGCCTTATCGTGTGCG 199136 Query 131451 CCATGACGGCCACCGGCACCAGCCTGTGCAACCCGGACGACCCGGGCATGCTGGACGTCT 131510 |||||| |||||| | || | | | |||| ||||| ||||||||||||||| Sbjct 199135 GCATGACCTCCACCGACTTCACCATCGCCGACCCCACGGACCCCGGCATGCTGGACGTCG 199076 Query 131511 CGGGCTTCGACTCGACCGTTCCGCAGCTTCTCACCGATCACTCGGCGGGTC 131561 ||||||||| | | || || | || ||| |||| || | |||||| Sbjct 199075 TCGGCTTCGACACCGCTGTGCCCAACATTATCAGCGATTTCTTGACGGGTC 199025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500847820755360