Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1527 228 7e-55 >seq1527 Length=269439 Score = 228 bits (252), Expect = 7e-55 Identities = 237/311 (76%), Gaps = 0/311 (0%) Strand=Plus/Plus Query 34321 GTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGG 34380 ||||| || |||||||| | | || | || ||||||||||||||||| || | | | Sbjct 102195 GTCTCAGGATTGTCACAAGCGGTGCAGAGAACGAACTTGCGGATGAAACCGTCCAAGATG 102254 Query 34381 TCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCG 34440 ||||| | ||| ||| |||||| |||||||||||| | || ||||| |||| || Sbjct 102255 TCCTGAAGCTTCGCGGCGTCGTGCTCTCCGTTGACGATGTAGCGCTCGTTCTTGTTGTCA 102314 Query 34441 ACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGT 34500 | | ||||||||||| |||||||| ||||||||||| |||||||| | | || ||| Sbjct 102315 ATGTTGGTTTGCGCGCCGAGCTCGCAGCCGAAGTACTTCGTCGGGTAGGTCGGAGGGCGT 102374 Query 34501 CCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTT 34560 | |||| ||| ||||| || | ||||||| ||||||| |||||||||||||| || ||| Sbjct 102375 TCCAGCGACTTCGCGATATCAGCCATGTTGGCGATGACCGTCTTGATGCCGTTTCCTTTT 102434 Query 34561 CCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTG 34620 ||||||||||| || || || ||||| ||||| |||||||| | ||| || ||| Sbjct 102435 CCTTCGACCTTCGCCAGGAGTCGGGGCATCTTGTATCGGTAGAAGGGGTCGAGAACGTTG 102494 Query 34621 CGGTTAACGTT 34631 || || ||||| Sbjct 102495 CGATTGACGTT 102505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412833740786066