Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq652 122 6e-23 seq1419 114 8e-21 seq1117 114 8e-21 seq1526 98.7 6e-16 seq1347 82.4 5e-11 >seq652 Length=32697 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | |||| ||||||||| ||||| ||||| || | || | || Sbjct 6645 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGTTGAGAGTCCGGCCGTCC 6586 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| || || ||||| || | || | ||||||||||| Sbjct 6585 TCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCC 6526 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | ||||| ||| | ||||| |||| ||| |||||| Sbjct 6525 TGGATCTTGGCCTTGACGTTCTCAATCGAGTCAGAACCTTCGACCTCAAGGGTGATGGTC 6466 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| || ||||| |||||||||||||| Sbjct 6465 TTGCCCGTAAGAGTCTTGACAAAGATCTGCAT 6434 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| |||| ||| ||||||||| ||||| ||||| || | || | || || Sbjct 6870 ACCAAATGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGTTGAGAGTCCGGCCGTCCTCG 6811 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || ||||| || |||||||| || || ||||| || | || | ||||||||||| | Sbjct 6810 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGG 6751 Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948 || || |||||| | ||||| ||| | ||||| |||| ||| |||||||| Sbjct 6750 ATCTTGGCCTTGACGTTCTCAATCGAGTCAGAACCTTCGACCTCAAGGGTGATGGTCTTG 6691 Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || ||||| ||||||||||||||| Sbjct 6690 CCCGTAAGAGTCTTGACAAAGATCTGCATG 6661 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| ||| |||| |||| || || ||||| || || || Sbjct 7081 CTCCTTCTGGATGTTGTAGTCGTTGAGGGTGCGGCCATCCTCAAGCTGCTTGCCAGCAAA 7022 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 || ||||| ||||| ||| | || | ||||||||||| | || || || ||| Sbjct 7021 AATAAGTCGCTGCTGATCTGGGGGAATGCCCTCCTTGTCTTGAATCTTGGCCTTAACGTT 6962 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | ||||| || | ||||| || | || || |||||||| || |||||||| || Sbjct 6961 CTCGATCGAATCGGACCCTTCGACTTCCAAAGTAATCGTCTTTCCAGTAAGGGTCTTCAC 6902 Query 34966 AAAGATCTGCAT 34977 |||||||||||| Sbjct 6901 AAAGATCTGCAT 6890 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| ||||| ||||| || | || |||| || || | |||||| || ||| Sbjct 11279 TCCTTCTGGATGTTGTAGTCATTGAGAGTCCGGCCATCCTCGAGCTACTTTCCAGCAAAG 11220 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || || |||||||| | || | |||| ||||| | | || |||||| Sbjct 11219 ATGAGGCGCTGCTGGTCGGGAGGGATGCCCTTTTTGTCCTGGGTCTTGGCCTTGACGTTC 11160 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | ||||| ||| || || |||| ||| ||||||||||||||||||||||| ||| Sbjct 11159 TCAATCGAGTCAGCATTTTCTACCTCAAGGGTGATGGTCTTTCCCGTGAGGGTCTTCACA 11100 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 11099 AAGATCTGCAT 11089 >seq1419 Length=601844 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | ||| ||||||||| ||||| ||||| || |||| |||| Sbjct 538643 AGGACCAAGTGGAGGGTCGACTCCTTCTGTATGTTGTAGTCGCTGAGAGTGCGGCCATCT 538584 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| ||||| ||||||| ||| ||||||||| | || | |||||||| || Sbjct 538583 TCCAACTGCTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTCCTTATCT 538524 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | ||| ||||||| |||| || || ||| Sbjct 538523 TGGATCTTAGCCTTCACGTTCTCGATGGTGTCAGACCCCTCGACCTCAAGAGTGATCGTC 538464 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || || ||||| || |||||||||||| Sbjct 538463 TTTCCTGTCAGAGTCTTCACGAAGATCTGCATG 538431 Score = 109 bits (120), Expect = 4e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||| ||||| ||||| ||| | || | || || || |||||||||||||| Sbjct 537939 CTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCTTCAAGCTGCTTTCCGGCGAA 537880 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || ||||| || | || | ||||||||||| | || || ||||| Sbjct 537879 GATCAAGCGCTGCTGATCGGGAGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATT 537820 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || ||||| || |||| ||| |||||||| |||||||| ||||| || Sbjct 537819 TTCGATAGTGTCGGAAGCCTCAACCTCAAGGGTAATGGTCTTCCCCGTGAGAGTCTTGAC 537760 Query 34966 AAAGATCTGCATG 34978 ||||| |||||| Sbjct 537759 GAAGATTTGCATG 537747 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||| ||||||||| ||||| ||||| ||| | || | || Sbjct 539146 AGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCT 539087 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| || || ||||| || | || | || |||||||| Sbjct 539086 TCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCGGGAGGGATTCCTTCCTTGTCC 539027 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || ||| ||| | || | ||| ||||||| || | ||| || ||| Sbjct 539026 TGGATCTTGGCTTTCACGTTCTCAATGGTGTCAGATCCCTCGACCTCCAGGGTGATCGTC 538967 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || || ||||| || |||||||||||| Sbjct 538966 TTTCCGGTCAGAGTCTTCACGAAGATCTGCATG 538934 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | ||| ||| || || ||||| ||||| ||| | | | || Sbjct 538415 AGGACCAAGTGGAGGGTCGACTCTTTTTGGATGTTGTAGTCGCTGAGGGTTCTTCCGTCC 538356 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| || |||||||| || || |||||||| | || | || |||||||| Sbjct 538355 TCGAGTTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCC 538296 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | ||| ||||||| || | ||| || ||| Sbjct 538295 TGGATCTTAGCCTTCACGTTCTCGATGGTGTCAGACCCCTCGACCTCCAGGGTAATCGTC 538236 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||| || || ||||| || |||||||||||| Sbjct 538235 TTTCCTGTCAGAGTCTTCACGAAGATCTGCATG 538203 >seq1117 Length=604131 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| |||| ||||||||| ||||| ||||| || | || | || Sbjct 393874 AGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGTTGAGAGTCCGGCCGTCC 393815 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| || || ||||| || | || | ||||||||||| Sbjct 393814 TCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCAGGAGGGATTCCCTCCTTGTCC 393755 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| |||||| | || || ||| | ||||| |||| || |||||| Sbjct 393754 TGGATTTTGGCCTTGACGTTCTCAATTGAGTCAGAACCTTCGACCTCAAGTGTGATGGTC 393695 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || ||||| || ||||| || |||||||||||| Sbjct 393694 TTGCCCGTAAGAGTCTTGACGAAGATCTGCATG 393662 >seq1526 Length=386723 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 |||||||| || | ||| |||||||| ||||| ||||| || | | | || Sbjct 246098 AGGACCAGATGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCTTCCGTCC 246157 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || |||||||| || || |||||||| | || | || |||||||| Sbjct 246158 TCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCC 246217 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || |||||||| || | ||| |||||| Sbjct 246218 TGGATCTTGGCCTTGACGTTCTCGATCGTGTCCGAAGCCTCGACTTCTAGGGTGATGGTC 246277 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || ||||| || ||||||||||| Sbjct 246278 TTTCCGGTCAGAGTCTTCACGAAGATCTGCAT 246309 >seq1347 Length=405773 Score = 82.4 bits (90), Expect = 5e-11 Identities = 107/146 (73%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 34834 CTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTT 34893 ||| |||||||||||||||||||| ||||| |||| | ||||||||||| | || || Sbjct 393126 CTTACCGGCGAAGATCAGTCGTTGTTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTT 393185 Query 34894 TTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || || || || ||||| || ||| || || || | ||| || || || ||| Sbjct 393186 CGCCTTAAC--ATTCTCGATCGAGTCCGAGGCTTCCACCTCGAGGGTGATCGTTTTACCC 393243 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| || || || |||||||| Sbjct 393244 GTCAGGGTTTTGACGAAAATCTGCAT 393269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325686599826878