Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_022752.1 Length=42665 Score E Sequences producing significant alignments: (Bits) Value seq31 616 4e-172 >seq31 Length=5916 Score = 616 bits (682), Expect = 4e-172 Identities = 965/1369 (70%), Gaps = 40/1369 (3%) Strand=Plus/Minus Query 24506 CGCGCGGCAACGACCTCATCCAGCGTGTCTTTAGCGACTATGTGATACAGGAACACTGGA 24565 || ||||| | || || ||||||||| | || || || | || | |||||| || Sbjct 4563 CGGGCGGCCAGCACTTCGTCCAGCGTGCCCTTGGCCTGGATCAGGTAAATGAACACCGGG 4504 Query 24566 CGCTCGTGGCCAGCCTGTTTCTGGCGTACAGGACCTATACGCTCGACAACCTGCAAATAG 24625 ||| ||| || ||||| ||||||| || ||||| |||||||| || | |||| ||| Sbjct 4503 CGCGGGTGACCGGCCTGCATCTGGCGCACCGGACCGATACGCTCCACGATCTGCGCGTAG 4444 Query 24626 TGCTCCAGGTTCCA-GCCTTGCGAAATAAACGCCAGATGATGCCCGCCGTCCTGTAAATT 24684 ||||| | |||||| | | || || ||| ||||| || |||||||| ||||| | || Sbjct 4443 TGCTCAAAGTTCCATGTGTCGCTGAA-AAATGCCAGGTGGTGCCCGCCATCCTGCATGTT 4385 Query 24685 CAAACCATGGCCCGCCGATGCAGGGTGCACGCACAAAATCTCGATTTCCCCGCGGTTCCA 24744 | || |||||||| || || ||||| |||||||| || ||||| | || |||||| Sbjct 4384 GAGGCCGTGGCCCGCGGACGCCGGGTGAACGCACAAGATTTCGATCTGACCTTTGTTCCA 4325 Query 24745 AGATTCCATCTGCTTATTACCCTTAGCACCTTTCGCAAACGCCTGCGCCTGGGGGAATCG 24804 || | ||| ||||| ||| || || ||| |||||||||| ||||| || Sbjct 4324 GCGCTCAACCTGGCGGTTACCGGCAGCGCCCTTTTTGAACTCCTGCGCCTGCGGGAACCG 4265 Query 24805 CCTAAGAATGCGCTCAAGTTCGTGCTTGAACTGATAGGCCACCAGCAGCGGCGCACCCTG 24864 | | |||||| | || ||||||||| ||||||||||||||| |||||| || || Sbjct 4264 TTTCAAGATGCGCGCCAGGTCGTGCTTGTACTGATAGGCCACCAACAGCGGGGCGCCGGA 4205 Query 24865 CAACTCCTCGACAATGGACTCTAACGCATCGAGTTTCGCGTCGTGCACTTTCTCCCAGTC 24924 |||||| |||| ||| ||||| | || || || |||||||||||||| ||| |||| || Sbjct 4204 CAACTCGTCGATAATCGACTCCAGGGCGTCCAGCTTCGCGTCGTGCACCTTCGCCCACTC 4145 Query 24925 TTTCGTTGCTTCACCATCCGGCCCCGACACATACACGGCACCGGAAGCAATCTGCAAGCA 24984 | | || || || || | ||||||||| || ||| || ||||||| ||| Sbjct 4144 GGTAGACCGCTCGCCGTCTTCGCCGGTCACATACACCGCCCCGCTGGCGATCTGCAGGCA 4085 Query 24985 CTTAGCCGTTTTAGCGGCGGCGTTAGCCGCTTCAACTTCTCCGCTCTCCAGTTCCGCGAA 25044 || || || || || ||||| |||||||| || || ||||| |||||||| ||||| Sbjct 4084 TTTGGCGGTACGGGCCGCCGCGTTGGCCGCTTCGACCTCGCCGCTATCCAGTTCGGCGAA 4025 Query 25045 TAACTTCTCCTCCATATCGATGTAGGCTTGACGCGCTTTCTTCGGCAGGTCAATCTCAAC 25104 || || |||||||| || |||| || | ||||| || |||| || | | || Sbjct 4024 TAGCTGTTCCTCCATTTCCTTGTACGCCTTGCGCGCCTTTGGTGGCATATCGACGACGAC 3965 Query 25105 CGGTACAATAACCGGTGCTTCACAACCGAACCACTCGGCGGCATCAATGGTAAGGCTGAT 25164 ||| || | || || ||||| || || ||||||| || || | ||| || |||| Sbjct 3964 CGGGACGACGACAGGCTTGTCACAGCCAAAGAACTCGGCCGCGTCCACGGTCAGACTGAC 3905 Query 25165 ATCCTTCATCTTCTGGTGAATCTCGTTATCCGCGCCTGGGCGAGCATGGTACTCCCGCGC 25224 || |||| |||||||| |||||| | || || || |||| | ||| || || || Sbjct 3904 GTCTTTCAGTTTCTGGTGGATCTCGGTGTCGGCACCGCGGCGGGGCGCGTATTCGCGGGC 3845 Query 25225 CATCGCA--GATTTGCCTTTCTGTACCGAGTTAAACCATCTATCGGTAAAGGCCGTGTAT 25282 || | ||| | |||||||| |||||| | ||||| | |||||| || || ||||| Sbjct 3844 GG-CGTAATGATCT-CCTTTCTGCACCGAGGTGAACCAGCGATCGGTGAAAGCAGTGTAA 3787 Query 25283 GAAGACCCAAGGCGTTCACCCGCGTCGATGAACCAGTTCTGACCCCACAAGTCTTTGAGG 25342 || || || || || || || |||| |||||||||||||||||||| ||||||||| Sbjct 3786 GAGCTGCCGAGACGCTCGCCGGCATCGACGAACCAGTTCTGACCCCACAGATCTTTGAGG 3727 Query 25343 CCGTTTGGTGATGGTGTACCGGTCAGGTTAATGAAACGCTTAACTTTACCGAACGCCACC 25402 ||||| |||||||| ||||||||||| || || || ||||| || ||||||||||| || Sbjct 3726 CCGTTCGGTGATGGCGTACCGGTCAGATTGATAAAGCGCTTCACCTTACCGAACGCTACT 3667 Query 25403 TTACTAAGCGCCTTTGCCCGCTTGCTACCGCCTGAACGGCTGCGGAAAGATTTCAGTTTC 25462 ||||| || | ||| || |||||||||||||| || ||||||||| ||||| || ||| Sbjct 3666 TTACTGAGTGTCTTCGCGCGCTTGCTACCGCCGGATTTGCTGCGGAACGATTTAAGCTTC 3607 Query 25463 GTGCTCTCATCGGCCACGATAACAGTAAAAGGCCAGTCGTCTTTGCCGTAGTAATCAATC 25522 || ||| ||||| || || || || || ||||| |||| |||||| || | | | Sbjct 3606 GTCGACTCGTCGGCAACAATGACGGTGAATGGCCACGCGTC---GCCGTAATAGCCGACC 3550 Query 25523 AGCCACTCGATAACTTCGTAGTTAGTGCACACCACATT---AGCGTCCGACTCCAGCGCC 25579 | ||| ||||| || || |||||| ||||||||| || | |||| | ||||||| Sbjct 3549 AACCAGTCGATCACCTCATAGTTAACGCACACCACGTTGAAATCGTC---GTTCAGCGCC 3493 Query 25580 GCTATGCGG--CGCTTCTCCGAACCGGTTGCATCGATGACACGAAGGCAAGGGAACCCCC 25637 || | |||| || ||| | ||||| | || | ||| || ||||| ||||| ||| Sbjct 3492 GCCAGGCGGTCGGCCTCTTTG--CCGGTGCCGTCCACGACGCGCAGGCATGGGAAATCCC 3435 Query 25638 ACTTAGTTTGTTCCGCGGGCCACGTACCCGACGCAACACGCAACGGGGCGAGGATTAATA 25697 |||| ||||| || ||||| || || || ||||| |||| ||| || ||||| | | Sbjct 3434 ACTTCACCTGTTCGGCCGGCCAGGTGCCTGATGCAACGCGCAGCGGCGCCAGGATAAGCA 3375 Query 25698 CCCGGTCTTC-TTCT--GTTAGCTG--CC-----------CGTTG-----CGAAACAGGC 25736 |||| || | ||| |||| | | || | ||| | ||||||| Sbjct 3374 CCCGATCGCCGGTCTGAGTTACCGGGTCCCAATCTTCCAGCTTTGAGGATTGGAACAGGC 3315 Query 25737 GGTTTAATGCCCACAGTACGCTGCCAGTCTTCCCGGCACCCATGCTTGCCCATATGTTGC 25796 |||| | | ||||| | || ||||| |||| ||||| | ||||| | |||| Sbjct 3314 GGTTCAGCGTCCACATGGTGGCCCCGGTCTTGCCGGAGCCCATTGTCGCCCACACATTGC 3255 Query 25797 AGCGATGGTGTCGCAACATGAACGAAGTCATTAGCTTTTGGTATTCGCG 25845 |||| |||| |||| ||| | |||||||| ||||| |||||||| Sbjct 3254 AGCGTGGGTGACGCAGCATATGCCGCGTCATTAGTTTTTGATATTCGCG 3206 Score = 389 bits (430), Expect = 1e-103 Identities = 701/1018 (69%), Gaps = 10/1018 (1%) Strand=Plus/Minus Query 28085 TAATATCCGCGCGCCAGGTTCTGAGGCTGAAAACCTTTCCCGGCCCATCGCAGTGTTCGC 28144 || || ||||||||||||||||| ||||| || ||||| |||||||| ||||| || || Sbjct 1184 TAGTACCCGCGCGCCAGGTTCTGCGGCTGGAAGCCTTTACCGGCCCAGCGCAGCGTGCGT 1125 Query 28145 TTCGCTCCGCCGTATTGCAGACAACCTCGACGGCGGTCATCGGAAGAACGACCTAACAGC 28204 || || || ||||| ||||| || || || ||||| | ||| || | || | |||| Sbjct 1124 TTAGCCCCTCCGTACTGCAGGCACCCGCGGCGGCGCCCGTCGCGCGACAGGCCGAGCAGC 1065 Query 28205 AACGGCGCGTATTTCGTCGATGCGGTGGAAGCAGCCCCGAGACGCATCTCGATAATAGTG 28264 | ||| |||||||| |||||||||||||| || || || || ||||| ||||| | | Sbjct 1064 AGCGGAGCGTATTTTGTCGATGCGGTGGACGCCGCGCCCAGGCGCATTTCGATCAGCTCG 1005 Query 28265 CGCGCATCGTCCGGTAAATCCTCATCTGCCAGCAAGTCGTTAAGCGTCGACTTCTGTGCG 28324 ||||| |||||||| | || || ||||||| |||||| |||||||| ||||| ||| Sbjct 1004 CGCGCCTCGTCCGGCAGGTCGGGGTCGGCCAGCAGGTCGTTTAGCGTCGATTTCTGCGCG 945 Query 28325 TTGTGGATGCGGTGTGCCGGTGCTAGTTCCTGTAAAATAGGCAAGAAGTCTTTGCCGGTT 28384 || |||| || ||||| || || || | | | |||| |||| ||||| Sbjct 944 TTCGGGATTTCATGCGCCGGCGCCAGGTCGCGCAGCGTCGGCAGGAAGGAGGCCCCGGTC 885 Query 28385 AGTGAACCGCCATATTTACGTTG--GGCTTCTTCCTGTAACTCTTCTTTATGGCGCGTGA 28442 || | ||| || | | ||| ||| || |||| | ||||| || |||||||| | Sbjct 884 AGGCCGCTGCCGTACT--CCTTGGTGGCCTCAGCCTGCAGCTCTTGCTTGTGGCGCGTCA 827 Query 28443 CTGCTTCAATCGCTGCTTCCGCCAATGCCACATCAACCTTAAATCCTCGGTCATTAATCA 28502 | || || |||||||| | ||||| | || || || || || ||||| || |||| Sbjct 826 CGGCCTCGATCGCTGCCTTGGCCAAGTCGACGTCCACACAGAAGCCGCGGTCGTTGATCA 767 Query 28503 CCTGGTCTAAGT-GCAGCACGCGGTCTTCGAACTCAGAATTCCCCCACTTAGGCATTTTC 28561 |||||| |||| ||| | || || ||| | || ||||| | || || Sbjct 766 GCTGGTC-AAGTACCAGGATTTCGTTCTCCTTCTCGGTGTTGCCCCAGGTCGGGATGCGG 708 Query 28562 TTATACACTTCACGCATGGACGTAATGTCGCTTTTTGCGTATGCAATAAATTCTGCCCAC 28621 | |||||| || ||||||||| |||||||| ||||| || |||| |||||| Sbjct 707 TAATACACCTCGCGCATGGACAGGATGTCGCTGCGGGCGTACTTGATGAATTTGGCCCAC 648 Query 28622 TCTTTTGGGTGGGTATCGGCAGTATAACGTCGAATCTTATAGTTCTTGGGCGTAGGCTTA 28681 || | ||||| ||| |||| || || || || | ||| || ||| |||||||||||| Sbjct 647 TCGTCGGGGTGCGTAGCGGCCGTGTAGCGGCGCACCTTGTACGACTTAGGCGTAGGCTTA 588 Query 28682 CTGAATCGCTGTATCAGCGCCTTACCGCGTTTATCCTTAGC--CATGCTTGCGTCAATGT 28739 | ||| || | ||||||||||| || || ||||| || |||| | || | | Sbjct 587 CAGAAGCGGTTGATCAGCGCCTTGCCCGCCTTGTCCTTGGCGTTCTGCT--CATCGACGC 530 Query 28740 TTAAAACCTCACACAGCGCGGCCAGTGAACCCGGGAGGGCATGTCGGAACGCGACTATCA 28799 || || || || || |||| |||||| || || || |||||||| | |||| Sbjct 529 CTAGCACGGTGCATAGTGCATCCAGGCTACCCGGCAGCGCGTGGCGGAACGCCATGATCA 470 Query 28800 TAGTGTCTATAATGTTTTCTACCAGGAGTTCGAATCCCCAGCAATGCTTAATAACTGGTC 28859 | |||||| || || | | ||| ||| | |||||||| | || | | | Sbjct 469 TGGTGTCTTCGATATTGGCCGGCGGGATATCGTAGCCCCAGCATTCTCGCATCAGCAGCC 410 Query 28860 GGTCGAACATAAGGAAGTTTTGGCCTACCAGTTTGAGATTGCTGTCTGGTTTTTGCAGCT 28919 ||||||||| ||| ||| || ||||||| | | | | || || | ||| | Sbjct 409 GGTCGAACAGCAGGCCGTTCTGCATTACCAGTCGGCTTTCGGTATCGGGCCTCGCCAGTT 350 Query 28920 TTAGCATCGCCCGACGCAAATCACGCGGCATATCGCTGCCGTCGGTGGCGTCCCATACTT 28979 ||| ||| || || || |||||||| |||||||||||||||||||||||| | Sbjct 349 CGCGCAGCGCACGTTTCAGGTCGCGCGGCATGCGGCTGCCGTCGGTGGCGTCCCATACCT 290 Query 28980 GCACAGGGCCTTCATCGAAAGCGTAGGTGCAGATAACAATTTCGGTAGTCGGATGTTCGG 29039 |||| | || ||||| |||||| ||||||| | |||||||||| | ||||| | Sbjct 289 GCACCTTTTCATCGTCGAACGCGTAGCTGCAGATCATGATTTCGGTAGATAGGTGTTCCG 230 Query 29040 CGTAAGCATAGGAACCGACtttttttAAATCGGCTTCTGAAAATGTTTCAGTATCGAG 29097 | || ||||||| ||| |||||| || |||||||| ||| | || || |||||||| Sbjct 229 CATACGCATAGGCGCCGCATTTTTTCAAGTCGGCTTCGGAATACGTCTCGGTATCGAG 172 Score = 190 bits (210), Expect = 6e-44 Identities = 404/594 (68%), Gaps = 7/594 (1%) Strand=Plus/Minus Query 27459 CGTCTTTAAGGTCGCACCAGAAAGCTACGGTTTGCGGGTGCGATTCACGCCACATACGTT 27518 |||||| ||| || |||||| || || || | ||||||||| || |||||||| || | Sbjct 1882 CGTCTTCAAGATCCTGCCAGAATGCCACTGTCTCCGGGTGCGACTCGCGCCACATGCGCT 1823 Query 27519 TAATAGCATCACATGTACGCCATACTTTCTTATCGAGAATATACGATGGACGGTCATCCT 27578 | ||||| || || || ||| || || || |||||||| ||||| | | Sbjct 1822 TGATAGCGTCGCAGGTCATCCACACCTTGCGCGGCAGGTCGTACGATGGTCGGTCGGCTT 1763 Query 27579 TCTCCCCCGGACGCGGCGGCCGTTTTGCCTCCTGTATACGCGCCCACTCATACCCGCGAG 27638 ||| ||| ||| || || |||||| || || || | || | ||||| | Sbjct 1762 TCTTGCCCTTTGGCGCGCGCTTATTCTTCTCCTGAATGCGGGCGAATTCGAAGCCGCG-G 1704 Query 27639 CG-GTAGCGGCCCAGATATGGTCGGGGAAAGTTCCGGCCATTGTTTTG-GCCATCTCAAT 27696 || | |||||||| || || || ||||| || || |||| || ||| ||||||| Sbjct 1703 CGCGCGGCGGCCCAAATGTGATCCGGGAATGTGCCATCCAT-GTCTTGCGCCATCTGGTA 1645 Query 27697 AAGGTCAAGACCTAAGTTTTTGGCGAATGTAACGAACGCTCCGACGCCACCCTCATAGCC 27756 ||||| || || | |||||||||||| | |||||| | || || || | || || Sbjct 1644 CAGGTCGAGGCCGAGGTTTTTGGCGAACTGCAGGAACGCCGCCACCCCGCCGCCGTACCC 1585 Query 27757 GAGGCCAAGCTCGCAAGCTTTTCCTATCTGTCTGATATCCTTAAAGTTTTTCTTAATATC 27816 ||||| || ||||| || || || ||||| | | || || || | ||| ||| Sbjct 1584 CAGGCCGAGTTCGCAGGCCTTGCCGATCTGCCGTAGGTCTTTGCGATTCTCCTTGATAAA 1525 Query 27817 ATCTGGATCCATGCCGAACATCTTTCCTGCCGTTACGCAGTATATATCAAGACCCGCG-C 27875 | || || | || ||||||||| || |||||| ||||||| || || | | | Sbjct 1524 GCCGGGGTCGAGGCGGAACATCTTGCCGGCCGTTTCGCAGTAGATGTCGCGTTTTTTGTC 1465 Query 27876 GGA-AAG-TATCAAGAGCTGTTTCTTCCCCGGACAGGAAGGCAAGCCCTCGCCCTTCAAC 27933 ||| ||| || |||||||| | ||| || || | |||| ||||| |||||||| || Sbjct 1464 GGAGAAGACGTCCAGAGCTGTATGTTCGCCCGAAATCCAGGCCAGCCCGCGCCCTTCCAC 1405 Query 27934 GTTGGAATAGTCCGCAACAACAAACTTACACCCGTCTTCCGGGATTATACAGCTGCGGAC 27993 ||| |||||||| |||||||| || ||| || | ||| |||| || || || || Sbjct 1404 GTTTGAATAGTCGGCAACAACGAATTTATTACCTTTTTCAGGGACAATGCATGATCGCAC 1345 Query 27994 AGTGGATGCCGTTAGCTTGGCCACATCAAAACGGCGGTGTGCACGGCCTTTAAG 28047 |||| ||| | |||||||| || || ||||| || || || |||||||| || Sbjct 1344 GGTGGTTGCGGCCAGCTTGGCTACGTCGAAACGTCGATGCGCGCGGCCTTTCAG 1291 Score = 118 bits (130), Expect = 3e-22 Identities = 201/287 (70%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 26393 ACTATAATAGTTCGCTATTAGGTCGTCAACCTGT--TTAAACGAACCAACGACAAAAACA 26450 |||||||||||| || |||||| ||||||||| || | || ||| ||| ||| Sbjct 2756 ACTATAATAGTTTGCGATTAGGCTGTCAACCTGCGATTTGCTG--CCGACGGTAAACACA 2699 Query 26451 TTTGCGCCACGTTTACGCATACGCTCGTGCTCGCGTAACTGGTGGGGGTCTGGCTTCGTG 26510 || ||||| || || |||| || |||||||||||| |||||| ||||||| ||| Sbjct 2698 TTGGCGCCGCGCTTTTGCATGCGTTCGTGCTCGCGTGCCTGGTGCGGGTCTGTGCCGGTG 2639 Query 26511 TTTTCGTCTTTCTTAACCTCGACGAACCAGACGATGTCACCGGGGAGGATTACCAGCAGG 26570 ||||||||||| |||||||||||||| |||| | | | || || | |||||||| Sbjct 2638 GCCTCGTCTTTCTTCACCTCGACGAACCACACGACGCCTCTCGGCAGAAGCACCAGCAGA 2579 Query 26571 TCGGGAGCGCCGGAGCGCGCCTCATAAGACAGTTTACGAACGAGGCCACCAATAGCCTCG 26630 ||||| || |||| |||| || | ||| | || ||| | || | ||| Sbjct 2578 TCGGGGCACCCATTGCGCCCCTCGTATCGGATTTTTCTTACCAGGGCGCCGAGCTTCTCA 2519 Query 26631 AA-TCGCTCTTTTGCGTATTTCTGAATCTTTCCTTCCGGGGTCATGA 26676 || ||| |||| ||||| || | || ||||| |||||||||| Sbjct 2518 AACTCG-GCTTTGGCGTAGGCTTGGACTTTCCCTTCAGGGGTCATGA 2473 Score = 87.8 bits (96), Expect = 5e-13 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 27026 TCCGGGGTCTCGCATACCAGTTCATCATGAACCGAAAGAACTATAGGGTACCCGCCAGCC 27085 ||||| || ||| | |||||| |||||||| || | || || || ||| | ||| Sbjct 2357 TCCGGCGTTTCGGTAATCAGTTCGTCATGAACACTCAGGATGATCGGATAGCCGGCGGCC 2298 Query 27086 TCAACATTAAGCATTGCGTAGGCCAATAAGTCACGACAAAACGCCTGAACGATGTTCTCA 27145 ||||| |||| | |||||| ||||| || || | |||||| |||||||| || Sbjct 2297 TCAACGACGGGCATCGACCAGGCCAGCAAGTCGCGGCACAGCGCCTGCACGATGTTTTCC 2238 Query 27146 -CAAGCCTTTCCGCCGTGTGTGTACAGGGTAGTCCACTGCCGTGTTAACTGGTTCTCGCC 27204 | ||| || ||||||| ||| || | |||||||||||| |||||||||||| Sbjct 2237 GCCAGC-TTGCCGCCGTAGGTGAACTGCCAGCCCCACTGCCGTGTGGTCTGGTTCTCGCC 2179 Query 27205 CTGGTACTTAAT 27216 |||||| || || Sbjct 2178 CTGGTATTTGAT 2167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136403869831788