Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq1526 95.1 1e-14 seq1419 82.4 7e-11 >seq1526 Length=386723 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 ||||| || | ||| | || | ||| | || ||||| || || |||||||| ||||| Sbjct 246311 CCTCCACGGAGACGGAGGACCAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGCTG 246370 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | || | |||||||||||| || ||||| |||| || || ||||| || ||||| Sbjct 246371 AGGGTACGGCCGTCTTCGAGTTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGGAGGG 246430 Query 137305 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACT 137364 || ||||| ||||| || || || | | || | ||||| | | || ||| Sbjct 246431 ATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGACGCCTCGACT 246490 Query 137365 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | |||||| ||||||| || || ||||| |||||||| Sbjct 246491 TCCAGGGTGATCGTCTTTCCGGTCAGAGTCTTCACGAAGATTTGCAT 246537 >seq1419 Length=601844 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 137184 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 137243 ||| || || | ||| | ||| | || | || || || || || |||||||| ||||| Sbjct 539162 GCCACCACGAAGACGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCT 539103 Query 137244 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 137303 | || | |||||| || || || ||||| |||| ||||| |||||||||||||| Sbjct 539102 GAGGGTACGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCGGGAGG 539043 Query 137304 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTAC 137363 || ||||| ||||| || || ||| | | || | ||||| | || || Sbjct 539042 GATTCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCAATGGTGTCAGATCCCTCGAC 538983 Query 137364 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 || | || | |||||| ||||||| || || ||||| || ||||| Sbjct 538982 CTCCAGGGTGATCGTCTTTCCGGTCAGAGTCTTCACGAAGATCTGCAT 538935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488534461178400