Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_023714.1 Length=153882 Score E Sequences producing significant alignments: (Bits) Value seq988 100 3e-16 >seq988 Length=203328 Score = 100 bits (110), Expect = 3e-16 Identities = 201/294 (68%), Gaps = 13/294 (4%) Strand=Plus/Minus Query 129262 TTCGGCGGGACCGACTGCGCGCTGCCGCTGGTCTGGGCCAAGGAGGCCAAG--GCCGAGT 129319 |||||| | ||||||||||||| |||| || ||||||||| | || ||| |||| | Sbjct 199313 TTCGGCAGTACCGACTGCGCGCAGCCGATGCTCTGGGCCACGCAGAAGAAGAAGCCG--T 199256 Query 129320 TCGACACCTTCCAGATCTACACCGACAACGAGACCTGGGCGGGCAACATCCACGTCGACC 129379 ||||| | ||| ||| |||||||||||| |||||| || | | ||| | Sbjct 199255 TCGACGCGTTCATCGTCTTCACCGACAACGACACCTGGCACGGAGAAGTGCACCCGTTCG 199196 Query 129380 AGGCGCTGGAGCAGTACCGTCAGGCCTCGGGCATC---GATGCTCGGGTGGAGATCGTG- 129435 ||||| | || ||||||| || || ||||||| ||||| || | |||||| Sbjct 199195 AGGCGATTAAGGAGTACCGCGAGTCCATGGGCATCGAGGATGCGCGCCT---TATCGTGT 199139 Query 129436 --GCCATGACGGCCAACGGCATCAGCCTGTGCAACCCGGACGACCCGGGCATGCTGGACG 129493 | |||||| ||| || | ||| | | | |||| ||||| ||||||||||||| Sbjct 199138 GCGGCATGACCTCCACCGACTTCACCATCGCCGACCCCACGGACCCCGGCATGCTGGACG 199079 Query 129494 TCTCGGGCTTCGACTCGACCGTTCCGCAGCTTCTCACCGATCACTCGGCGGGTC 129547 || ||||||||| | | || || | || ||| |||| || | |||||| Sbjct 199078 TCGTCGGCTTCGACACCGCTGTGCCCAACATTATCAGCGATTTCTTGACGGGTC 199025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492284787951840