Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_023725.1 Length=156646 Score E Sequences producing significant alignments: (Bits) Value seq988 107 2e-18 >seq988 Length=203328 Score = 107 bits (118), Expect = 2e-18 Identities = 200/291 (69%), Gaps = 7/291 (2%) Strand=Plus/Minus Query 131736 TTCGGCGGGACCGACTGCGCGTTGCCGTTGGTCTGGGCCAAGGAGTCGAAG--GCCGAGT 131793 |||||| | |||||||||||| |||| || ||||||||| | || |||| |||| | Sbjct 199313 TTCGGCAGTACCGACTGCGCGCAGCCGATGCTCTGGGCCACGCAGAAGAAGAAGCCG--T 199256 Query 131794 TCGACACCTTCCAGATCTACACCGACAACGAGACCTGGGCGGGCGACATCCACGTCGACC 131853 ||||| | ||| ||| |||||||||||| |||||| || || | ||| | Sbjct 199255 TCGACGCGTTCATCGTCTTCACCGACAACGACACCTGGCACGGAGAAGTGCACCCGTTCG 199196 Query 131854 AGGCGCTGGAGCAGTACCGTCAGTCCTCGGGTATCGATGCTCGGGTCGAGATCGTGT--- 131910 ||||| | || ||||||| ||||| ||| ||||| | | | | ||||||| Sbjct 199195 AGGCGATTAAGGAGTACCGCGAGTCCATGGGCATCGAGGATGCGCGCCTTATCGTGTGCG 199136 Query 131911 CCATGACGGCCACCGGCACCAGTCTGTGCAACCCGGACGACCCGGGCATGCTGGACGTCT 131970 |||||| |||||| | || | | |||| ||||| ||||||||||||||| Sbjct 199135 GCATGACCTCCACCGACTTCACCATCGCCGACCCCACGGACCCCGGCATGCTGGACGTCG 199076 Query 131971 CGGGCTTCGACTCGACGGTGCCGCAGCTTCTCACCGATCACTCGGCGGGTC 132021 ||||||||| | | ||||| | || ||| |||| || | |||||| Sbjct 199075 TCGGCTTCGACACCGCTGTGCCCAACATTATCAGCGATTTCTTGACGGGTC 199025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501129415257120