Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_026017.1 Length=41880 Score E Sequences producing significant alignments: (Bits) Value seq31 627 2e-175 >seq31 Length=5916 Score = 627 bits (694), Expect = 2e-175 Identities = 862/1194 (72%), Gaps = 17/1194 (1%) Strand=Plus/Minus Query 25995 ACCTCGTCCAGCGTGTCTTTAGCAACGATGTGATAGAGGAACACCGGGCGTTCGTGGCCT 26054 || |||||||||||| | || || ||| | || | |||||||||||| ||| || Sbjct 4551 ACTTCGTCCAGCGTGCCCTTGGCCTGGATCAGGTAAATGAACACCGGGCGCGGGTGACCG 4492 Query 26055 GCCTGCTTCTGGCGGACAGGGCCTATACGCTCAACGACCTGCAAATAGTGCTCAAGGTTC 26114 |||||| ||||||| || || || |||||||| |||| |||| |||||||||| |||| Sbjct 4491 GCCTGCATCTGGCGCACCGGACCGATACGCTCCACGATCTGCGCGTAGTGCTCAAAGTTC 4432 Query 26115 CA-GCCTTGCGAGATGAATGCCAGATGATGCCCCCCGTCCTGTAAATTCAAACCATGGCC 26173 || | | || || |||||||| || ||||| || ||||| | || | || ||||| Sbjct 4431 CATGTGTCGCT-GAAAAATGCCAGGTGGTGCCCGCCATCCTGCATGTTGAGGCCGTGGCC 4373 Query 26174 GGCTGACGCAGGGTGTACACATAATATTTCGATTTCACCACGGTTCCA-CGCTTCCATCT 26232 || ||||| ||||| || || || |||||||| | ||| |||||| |||| | | || Sbjct 4372 CGCGGACGCCGGGTGAACGCACAAGATTTCGATCTGACCTTTGTTCCAGCGCT-CAACCT 4314 Query 26233 GCTTATTACCCTTTGAACCTTTAGCAAACGCCTGCGCCTGTGGGAAACGCTTAAGGATGC 26292 | ||||| | || || ||| |||||||||| ||||| || || | ||||| Sbjct 4313 GGCGGTTACCGGCAGCGCCCTTTTTGAACTCCTGCGCCTGCGGGAACCGTTTCAAGATGC 4254 Query 26293 GCTCCAGTTCATGCTTGAACTGATAGGCAACCAGTAACGGCGCACCCTGTAACTCCTCAA 26352 || |||| || |||||| |||||||||| |||| | ||| || || ||||| || | Sbjct 4253 GCGCCAGGTCGTGCTTGTACTGATAGGCCACCAACAGCGGGGCGCCGGACAACTCGTCGA 4194 Query 26353 CAATCGACTCCAGCGCATCCAGTTTCGTGTCGTGCACTTTCTCCCAGTCTTTCGTTGCTT 26412 |||||||||||| || ||||| |||| ||||||||| ||| |||| || | | | Sbjct 4193 TAATCGACTCCAGGGCGTCCAGCTTCGCGTCGTGCACCTTCGCCCACTCGGTAGACCGCT 4134 Query 26413 CTCCATCTGGTCCTGATACATACACGGCACCGGACGCAATCTGCAAACACTTCGATGTCT 26472 | || ||| || | |||||||| || ||| || ||||||| || || | || Sbjct 4133 CGCCGTCTTCGCCGGTCACATACACCGCCCCGCTGGCGATCTGCAGGCATTTGGCGGTAC 4074 Query 26473 TCGCTGCCGCATTAGCCGCTTCAACTTCTCCGCTCTCCAGTTCCGCAAATAATTTCTCCT 26532 || ||||| || |||||||| || || ||||| |||||||| || |||| | |||| Sbjct 4073 GGGCCGCCGCGTTGGCCGCTTCGACCTCGCCGCTATCCAGTTCGGCGAATAGCTGTTCCT 4014 Query 26533 CCATATCTATGTAAGCCTGACGTGCTTTCTTCGGCAGGTCGATTTCAACAGGTACGATAA 26592 |||| || |||| |||| || || || |||| |||| | || || |||| | Sbjct 4013 CCATTTCCTTGTACGCCTTGCGCGCCTTTGGTGGCATATCGACGACGACCGGGACGACGA 3954 Query 26593 TCGGCGCTTCGCAACCAAACCACTCGGCGGCGTCAATGGTCAGGCTTACATCCTTCATCT 26652 ||| || || ||||| ||||||| ||||| | |||||| || || || |||| | Sbjct 3953 CAGGCTTGTCACAGCCAAAGAACTCGGCCGCGTCCACGGTCAGACTGACGTCTTTCAGTT 3894 Query 26653 TCTGATGAATCTCATTATCTGCGCCAGGGCGTGCGTGGTATTCACGGGC--CATAGCCGA 26710 |||| || ||||| | || || || |||| | |||||| ||||| | || || Sbjct 3893 TCTGGTGGATCTCGGTGTCGGCACCGCGGCGGGGCGCGTATTCGCGGGCGGCGTAAT-GA 3835 Query 26711 TTTACCTTTCTGTACCGAGTTAAACCAGCGGTCAGTAAAGGATGTGTATGAAGACCCCAG 26770 | | |||||||| |||||| | |||||||| || || || | ||||| || || || Sbjct 3834 TCT-CCTTTCTGCACCGAGGTGAACCAGCGATCGGTGAAAGCAGTGTAAGAGCTGCCGAG 3776 Query 26771 GCGCTCGCCAGCGTCGATGAACCAGTTCTGCCCCCACAAGTCTTTCAAGCCGTTAGGTGA 26830 |||||||| || |||| |||||||||||| ||||||| ||||| | |||||| ||||| Sbjct 3775 ACGCTCGCCGGCATCGACGAACCAGTTCTGACCCCACAGATCTTTGAGGCCGTTCGGTGA 3716 Query 26831 TGGTGTACCTGTCAGGTTGATGAAACGCTTGACCTTTCCGAACGCCACTTTACTAAGAGC 26890 ||| ||||| ||||| ||||| || ||||| ||||| |||||||| |||||||| || | Sbjct 3715 TGGCGTACCGGTCAGATTGATAAAGCGCTTCACCTTACCGAACGCTACTTTACTGAGTGT 3656 Query 26891 CCTCGCCCGCTTGCTTCCGCCAGAACGACTGCGGAACGATTTCAGCTTCGTGCTTTCATC 26950 | |||| |||||||| ||||| || |||||||||||||| |||||||| || || Sbjct 3655 CTTCGCGCGCTTGCTACCGCCGGATTTGCTGCGGAACGATTTAAGCTTCGTCGACTCGTC 3596 Query 26951 GGCAACGATAACGGTAAAAGGCCAGTCGTCTTTGCCGTAGTAGTTGATCAACCACTCGAT 27010 |||||| || ||||| || ||||| |||| |||||| ||| || |||||| ||||| Sbjct 3595 GGCAACAATGACGGTGAATGGCCACGCGTC---GCCGTAATAGCCGACCAACCAGTCGAT 3539 Query 27011 AACTTCATAGTTAGTGCACACCACGTT---AGCGTCTGACTCGAGCGCCGCTACGCGACG 27067 || ||||||||| |||||||||||| | |||| | |||||||| | ||| Sbjct 3538 CACCTCATAGTTAACGCACACCACGTTGAAATCGTC---GTTCAGCGCCGCCAGGCGGTC 3482 Query 27068 CTTCTCGTTACCGGTTGCGTCGACAACACGCAGACAAGGGAAATTCCAACGTGCCTGTTC 27127 ||| || ||||| |||| || || ||||| || ||||||| ||| ||||||| Sbjct 3481 GGCCTCTTTGCCGGTGCCGTCCACGACGCGCAGGCATGGGAAATCCCACTTCACCTGTTC 3422 Query 27128 TGCGGGCCACGTACCAGACGCAACACGTAACGGGGCGAGGATTAACACGCGGTC 27181 || ||||| || || || ||||| || | ||| || ||||| | ||| || || Sbjct 3421 GGCCGGCCAGGTGCCTGATGCAACGCGCAGCGGCGCCAGGATAAGCACCCGATC 3368 Score = 583 bits (646), Expect = 2e-162 Identities = 1207/1771 (68%), Gaps = 40/1771 (2%) Strand=Plus/Minus Query 29728 CGGACCCTGGCCCCCGCCCAAAACTCTCGTCCCGGATTTCTGATTGCTGCAATTGCCGAA 29787 || || | ||| || ||||||||| | ||||||||||| |||| || || |||| Sbjct 1940 CGCACGCGGGCGCCAGCCCAAAACGCGCGTCCCGGATTCTTGATCGCCGCCTGCGCCGCG 1881 Query 29788 TCCTTAAGGTCATTCCAGAATTTCACTGTCTCCGGATGGGCCTCGCGCCACATGCGCTTA 29847 || | ||| || | ||||||| |||||||||||| || | |||||||||||||||||| Sbjct 1880 TCTTCAAGATCCTGCCAGAATGCCACTGTCTCCGGGTGCGACTCGCGCCACATGCGCTTG 1821 Query 29848 ATAGCATCGCAGGTGCGCCAGACTTCTTTGGGCAGCACATAGGAGGCCCGTTCGTCCTTT 29907 ||||| |||||||| ||| || | ||||| | || || | || ||| | || Sbjct 1820 ATAGCGTCGCAGGTCATCCACACCTTGCGCGGCAGGTCGTACGATGGTCGGTCGGCTTTC 1761 Query 29908 TTACCGGGTTTTGGAGGTCGTTTAGCCT---CCTGAATCCGCGCCCATTCATAACCTCGG 29964 || || ||||| | || ||| || ||||||| || || |||| | || ||| Sbjct 1760 TTGCCC---TTTGGCGCGCGCTTATTCTTCTCCTGAATGCGGGCGAATTCGAAGCCGCGG 1704 Query 29965 GCAGTGGCAGCCCAGATATGGTTGGGGAACGTGCCCCGCATTGTCTC-CGTCATCTTAAA 30023 | ||| ||||| || || | ||||| ||||| ||| |||| || ||||| | Sbjct 1703 CGCGCGGCGGCCCAAATGTGATCCGGGAATGTGCCATCCAT-GTCTTGCGCCATCTGGTA 1645 Query 30024 GAGGTCCAGCCCGTAAGTTTTAGCCATAGT-CATGAAGGCCCCTACGCCACCTTCGTAGC 30082 ||||| || ||| | ||||| | | | | || ||| ||| | || || || |||| | Sbjct 1644 CAGGTCGAGGCCG-AGGTTTTTGGCGAACTGCAGGAACGCCGCCACCCCGCCGCCGTACC 1586 Query 30083 CGAGGCCAAGCTCACAACACTTCCCGACCTGACGTAGGTCCTTACGGGTGGCCTTAAGCT 30142 | ||||| || || || ||| |||| ||| |||||||| || || | |||| | | Sbjct 1585 CCAGGCCGAGTTCGCAGGCCTTGCCGATCTGCCGTAGGTCTTTGCGATTCTCCTTGA--T 1528 Query 30143 CAA--CAGGGTCCATACCAAACATCTTACCGGCTGTGGCGCAATAGATATCAATCCCCGC 30200 || | ||||| | | |||||||| ||||| || |||| ||||| || Sbjct 1527 AAAGCCGGGGTCGAGGCGGAACATCTTGCCGGCCGTTTCGCAGTAGATGTCGCGTTTTTT 1468 Query 30201 G-CGGA-ACGTC-TCAAGGGCGG-ACGTCTCCCCCGCCGTCCAGGCTAACCCGCGCCCTT 30256 | |||| | | | || || || | | || || |||| ||||||| | ||||||||||| Sbjct 1467 GTCGGAGAAGACGTCCAGAGCTGTATGT-TCGCCCGAAATCCAGGCCAGCCCGCGCCCTT 1409 Query 30257 CCACGTTTGAGTAGTCTGCGACGAGCAACTTATTGCCTTTTTCCGGGATGATGCAACTGC 30316 |||||||||| ||||| || || | || ||||| |||||||| |||| ||||| | Sbjct 1408 CCACGTTTGAATAGTCGGCAACAACGAATTTATTACCTTTTTCAGGGACAATGCATGATC 1349 Query 30317 GGACAGTCGAGGCCGTCAGTTTAGATACATCAAAACGGCGATGCGCCCGACCCCTTAAAA 30376 | || || | || | ||| || | ||| || ||||| |||||||| || || | | | Sbjct 1348 GCACGGTGGTTGCGGCCAGCTTGGCTACGTCGAAACGTCGATGCGCGCGGCCTTTCAGCA 1289 Query 30377 GCAAATTGATGCCAAATGATAGCGGGTTAAGCCTGCGGTTCCAGTCTTCGTCGGACTCCC 30436 || | |||||||| | |||||||| || |||| ||| || |||| ||| || Sbjct 1288 GCTGCTGAATGCCAAAGGCCAGCGGGTTCAGTGTGCGCCACCACTCCGCGTCCGACATCC 1229 Query 30437 ACGGCTGGCGTACAAGTTTCTTTTCCTCGTTAGTT---GGGTCATCGTGGTAGTACCCGC 30493 | || ||| || | ||| | ||| | ||||| || ||||||||||| Sbjct 1228 AATCCTCGCGCAC------CGCCTCCCCTTTATTCTCCGGGTCGTCCGCGTAGTACCCGC 1175 Query 30494 GCGACAGGTTCTGTGGTTGGAACCCTTTACCTGCAAATCGTAAAGTGCGCTTTGCCCCGC 30553 ||| ||||||||| || ||||| |||||||| || | || | ||||| || ||||| | Sbjct 1174 GCGCCAGGTTCTGCGGCTGGAAGCCTTTACCGGCCCAGCGCAGCGTGCGTTTAGCCCCTC 1115 Query 30554 CATACTGGATGCACCCACGGCGTCGTCCGTCTTTAGACCGTCCTAGCAGGAGCGGTTTAT 30613 | ||||| | |||||| ||||| || ||||| ||| | || ||||| ||||| | Sbjct 1114 CGTACTGCAGGCACCCGCGGCGGCGCCCGTCGCGCGACAGGCCGAGCAGCAGCGGAGCGT 1055 Query 30614 ACTTTGTCGACGCCGTGGAGGCCGCGCCGAGGCGCATCTCAATGATCATGCGCGCATCGT 30673 | |||||||| || ||||| |||||||| |||||||| || || | | |||||| |||| Sbjct 1054 ATTTTGTCGATGCGGTGGACGCCGCGCCCAGGCGCATTTCGATCAGCTCGCGCGCCTCGT 995 Query 30674 CAGGCAAGTCGTCGTCCTCTAACAAACCTTCAAGCGTTGCTTTCTGCGCATTATAAATGT 30733 | |||| |||| ||| | | || | | ||||| | ||||||||| || || | Sbjct 994 CCGGCAGGTCGGGGTCGGCCAGCAGGTCGTTTAGCGTCGATTTCTGCGCGTTCGGGATTT 935 Query 30734 TATAGGCCGGTGCCAGTTCCCGAAGGATTGGCAGGAAGTCTTGACCCGTTAGCTTCCCAC 30793 || ||||| ||||| || || || | ||||||||| || || || | | Sbjct 934 CATGCGCCGGCGCCAGGTCGCGCAGCGTCGGCAGGAAGGAGGCCCCGGTCAGGCCGCTGC 875 Query 30794 CAAATTTCACCCTGGCCTCGTTTTTCAGCTCTTGCTTGTGGCGTTCAACTGCTGCTACCG 30853 | | | | ||||||| | |||||||||||||||||| || || | | || Sbjct 874 CGTACTCCTTGGTGGCCTCAGCCTGCAGCTCTTGCTTGTGGCGCGTCACGGCCTCGATCG 815 Query 30854 CCGCCTCAGCAAGAGCCG-TATCAACAAAGAAGCCTCGGTCGTTGATTAACTGGTCGAGT 30912 | |||| || | || || || ||| ||||||| ||||||||||| | |||||| ||| Sbjct 814 CTGCCTTGGCCA-AGTCGACGTCCACACAGAAGCCGCGGTCGTTGATCAGCTGGTCAAGT 756 Query 30913 TCCAGTACACGGTCCTCGAACTCTGAGTTACCCCAACGCGGCA---GCTTATGGAAGACT 30969 |||| | || ||| ||| | ||| ||||| ||| | | | || | || Sbjct 755 ACCAGGATTTCGTTCTCCTTCTCGGTGTTGCCCCAGGTCGGGATGCGGTAAT---ACACC 699 Query 30970 TCACGCATCG-CAGTGATGTCACTAACGGCGTACTTGACGAACAGCGCCCACTCGTCCGG 31028 || ||||| | ||| |||||| || ||||||||||| ||| ||||||||||| || Sbjct 698 TCGCGCATGGACAG-GATGTCGCTGCGGGCGTACTTGATGAATTTGGCCCACTCGTCGGG 640 Query 31029 GTGTGTTTCGGCGGTGTAGCGGCGGATTTTGTAGTTCTTCGGCGTCGGTTTAGAAAAACG 31088 ||| || |||| ||||||||||| | ||||| ||| ||||| || ||| | || || Sbjct 639 GTGCGTAGCGGCCGTGTAGCGGCGCACCTTGTACGACTTAGGCGTAGGCTTACAGAAGCG 580 Query 31089 CTTAATCAGCGCCTTGCCGCGTTTATCTTTCGCGTTGTCCGCAGATACACTCAGCACCTC 31148 || |||||||||||||| || || || ||||| | | || || | ||||| Sbjct 579 GTTGATCAGCGCCTTGCCCGCCTTGTCCTTGGCGTTCTGCTCATCGACGCCTAGCACGGT 520 Query 31149 ACACAACGCGTCAAGTGAACCCGGCAACGCGTGGCGAAACGCCCAAATCATCGTATCAAT 31208 || | || || || |||||||| ||||||||| |||||| ||||| || || Sbjct 519 GCATAGTGCATCCAGGCTACCCGGCAGCGCGTGGCGGAACGCCATGATCATGGTGTCTTC 460 Query 31209 GGTGTTGCTTACCGGAATATCAAAGTCCCAGCAGTGTTTCATGATGAGCCTGTCGAACAT 31268 | | ||| ||| ||||| || ||||||| | | ||| | |||| |||||||| Sbjct 459 GATATTGGCCGGCGGGATATCGTAGCCCCAGCATTCTCGCATCAGCAGCCGGTCGAACAG 400 Query 31269 TGAACCGTTATGCCACACCA-TCTTAATGCGACTGTTTGGCTTAACCAGGCGGCGTAGCG 31327 ||||| ||| |||| || | || | | ||| | |||| ||| |||| Sbjct 399 CAGGCCGTTCTGCATTACCAGTCGGCTTTCG-GTATCGGGCCTCGCCAGTTCGCGCAGCG 341 Query 31328 CGCGGTATAAATCCCCCGGCATGTCGCTGCCGTCGGTGCAATCCCATACCTGTACAGGCT 31387 | || | | || | ||||||| ||||||||||||| ||||||||||| || | Sbjct 340 CACGTTTCAGGTCGCGCGGCATGCGGCTGCCGTCGGTGGCGTCCCATACCTGCACCTTTT 281 Query 31388 CGTCGTCAAAAGCATAGGTACAGATGAGCACTTCGGTTGACGGGTGTTCGGCGTAAGCGT 31447 | ||||| || || ||| | ||||| | | |||||| || ||||||| || || || | Sbjct 280 CATCGTCGAACGCGTAGCTGCAGATCATGATTTCGGTAGATAGGTGTTCCGCATACGCAT 221 Query 31448 AGGAACCGACTTTCTTCAAATCGGCTTCGGA 31478 ||| ||| ||| ||||| ||||||||||| Sbjct 220 AGGCGCCGCATTTTTTCAAGTCGGCTTCGGA 190 Score = 82.4 bits (90), Expect = 2e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 29435 CCAGTAAATCGCGGCACAACGCCTGGATAATGTTTTCACACAATTTTCCGCCGTGGGTGT 29494 |||| || |||||||||| |||||| | |||||||| || || ||||||| |||| Sbjct 2275 CCAGCAAGTCGCGGCACAGCGCCTGCACGATGTTTTCCGCCAGCTTGCCGCCGTAGGTGA 2216 Query 29495 ACAAAGTTGTCCACTGGCGGGTGGTCTGATTTTCGCCCTGGTATTTAATGCGA 29547 || |||||| || |||||||| || |||||||||||||| |||||| Sbjct 2215 ACTGCCAGCCCCACTGCCGTGTGGTCTGGTTCTCGCCCTGGTATTTGATGCGA 2163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133891916426248