Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1419 125 7e-24 seq1526 116 4e-21 seq893 105 7e-18 seq1117 104 2e-17 seq652 100 3e-16 >seq1419 Length=601844 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | || || | ||||| || | ||||| ||||| || ||||||||||||| Sbjct 537976 TTCCTCCGCGAAGACGAAGAACGAGATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGC 537917 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | ||| || ||||| || || || || ||||| |||||||||||||| | Sbjct 537916 TGAGGGTACGGCCGTCTTCAAGCTGCTTTCCGGCGAAGATCAAGCGCTGCTGATCGGGAG 537857 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||| || || || || || || ||||| || | |||||||| | || | Sbjct 537856 GAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTTTCGATAGTGTCGGAAGCCTCAA 537797 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || |||||||| || || || | ||| || ||||| |||||||| Sbjct 537796 CCTCAAGGGTAATGGTCTTCCCCGTGAGAGTCTTGACGAAGATTTGCAT 537748 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || || || ||||| || ||||||||||||| | ||| | ||| || Sbjct 539143 ACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCTTCA 539084 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || || || | ||||||||||||||| || || ||||| || || || Sbjct 539083 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCGGGAGGGATTCCTTCCTTGTCCTGG 539024 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || ||| || || | ||||| || || || || || || || || || Sbjct 539023 ATCTTGGCTTTCACGTTCTCAATGGTGTCAGATCCCTCGACCTCCAGGGTGATCGTCTTT 538964 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | ||| || ||||| || ||||| Sbjct 538963 CCGGTCAGAGTCTTCACGAAGATCTGCAT 538935 Score = 105 bits (116), Expect = 7e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| || | || | ||| || || || || ||||| ||||||||||| | Sbjct 538202 CCTCCACGGAGACGGAGGACCAAGTGGAGGGTTGACTCTTTTTGGATGTTGTAGTCACTC 538143 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| ||||| ||||| |||||||| || || || Sbjct 538142 AAAGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGA 538083 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || ||||| || || || || || | |||||||| || || Sbjct 538082 ATGCCCTCCTTATCTTGGATCTTAGCCTTCACGTTCTCGATGGTGTCGGATCCCTCAACC 538023 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || | ||||| || || ||||| | || || ||||| ||||||||| Sbjct 538022 TCCAAGGTAATCGTCTTTCCGGTCAGCGTCTTGACGAAGATTTGCATT 537975 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| || | || | ||| || || || ||||| || ||||||||||||| Sbjct 538658 CCTCCACGGAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGTATGTTGTAGTCGCTG 538599 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || | ||| ||||| ||||| ||||| |||||||| || || || Sbjct 538598 AGAGTGCGGCCATCTTCCAACTGCTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGA 538539 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || ||||| || || || || || | ||||| ||| || || Sbjct 538538 ATGCCCTCCTTATCTTGGATCTTAGCCTTCACGTTCTCGATGGTGTCAGACCCCTCGACC 538479 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || || || | ||| || ||||| || ||||| Sbjct 538478 TCAAGAGTGATCGTCTTTCCTGTCAGAGTCTTCACGAAGATCTGCAT 538432 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | ||| || | || | ||| || || || || ||||| ||||||||||||| Sbjct 538430 CCTCCACGGAGACGGAGGACCAAGTGGAGGGTCGACTCTTTTTGGATGTTGTAGTCGCTG 538371 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| ||| ||||| || ||||| || || || | |||||||| ||||| || Sbjct 538370 AGGGTTCTTCCGTCCTCGAGTTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCGGGAGGA 538311 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || || || || || || | ||||| ||| || || Sbjct 538310 ATTCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATGGTGTCAGACCCCTCGACC 538251 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| || || || || | ||| || ||||| || ||||| Sbjct 538250 TCCAGGGTAATCGTCTTTCCTGTCAGAGTCTTCACGAAGATCTGCAT 538204 >seq1526 Length=386723 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 ||||||| | ||| || | || || || || ||||||||||| || ||||||||||||| Sbjct 246309 TTCCTCCACGGAGACGGAGGACCAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGC 246368 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | ||| ||||| || ||||| || || || | |||||||| || || | Sbjct 246369 TGAGGGTACGGCCGTCTTCGAGTTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGGAG 246428 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || || || || || ||||| || | ||||| |||| || | Sbjct 246429 GGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGACGCCTCGA 246488 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || || || || || ||||| | ||| || ||||| |||||||| Sbjct 246489 CTTCCAGGGTGATCGTCTTTCCGGTCAGAGTCTTCACGAAGATTTGCAT 246537 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 || || || | ||| || | || || || |||||||||||||| || |||||||||||| Sbjct 246080 TTGCCACCACGGAGACGGAGGACCAGATGGAGCGTGGATTCCTTCTGGATGTTGTAGTCG 246139 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | | || ||| || ||||| ||||| || || || | ||||||||| ||||| Sbjct 246140 CTGAGAGTCCTTCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGA 246199 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || ||||| || || || || || ||||| || | ||||| || | || Sbjct 246200 GGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTGTCCGAAGCCTCG 246259 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || || ||||| || ||||| | ||| || ||||| || |||||| Sbjct 246260 ACTTCTAGGGTGATGGTCTTTCCGGTCAGAGTCTTCACGAAGATCTGCATT 246310 >seq893 Length=1694367 Score = 105 bits (116), Expect = 7e-18 Identities = 272/413 (66%), Gaps = 6/413 (1%) Strand=Plus/Minus Query 7525 TACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTG 7584 |||||| |||| ||||||||| | | | || || || |||||||| |||| || Sbjct 1631772 TACTTGCTGAAGATCAACGGCAAGATCACCGAGCGTCCGCAGCACATGCTTATGCGTGTA 1631713 Query 7585 GCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCT 7644 || ||||| | ||| || ||||| ||||| ||| | ||||| ||| | | ||||| Sbjct 1631712 GCCGTGGGAGTCCACAAGGAGGACATCGACGCAGCCATCGAAACCTACAACCTCATGTC- 1631654 Query 7645 TTGAAACA---GTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCT 7701 | | | |||||||||||| ||||| ||| | || ||| || || | ||| Sbjct 1631653 --GGATCGCTGGTTTACGCACGCGTCGCCTACCCTCTTCAACGCCGGAACCTGCAAGCCC 1631596 Query 7702 CAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAAC 7761 || || ||||| || | || || |||| ||| ||| |||||||||||| | ||| Sbjct 1631595 CAGATGAGTTCGTGCTTCCTCCTGACGATGCACGACGACTCCATCGACGGCATCTTCAAG 1631536 Query 7762 ACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAAC 7821 || ||| | | |||||| || || || | || ||| || || || || |||| || Sbjct 1631535 ACCCTGTGGCAGTGCGCCCTGATCTCTAAGTCCGCCGGAGGCATCGGACTTAACGCTCAC 1631476 Query 7822 GACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAG 7881 | | || ||| || | |||| |||||||| | ||| |||| | Sbjct 1631475 TGCATCCGTGCCTCGGGAACGATGATCGCAGGTACCAACGGCACCTCCAACGGTCTGATC 1631416 Query 7882 CCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGAAA 7934 |||||| | || |||| ||| ||| ||| || | || || ||||| ||||| Sbjct 1631415 CCCATGCTCCGTGTGTACAACAACACGGCTCGCTACGTTGATCAGGGAGGAAA 1631363 >seq1117 Length=604131 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 || || || | ||| || | ||||| || || ||||| ||||| || |||||||||||| Sbjct 393892 TTACCACCACGGAGACGAAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 393833 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | || | ||| |||||||| ||||| || || || | |||||||||||| || Sbjct 393832 TTGAGAGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCAGGA 393773 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || || || || || || || ||||| ||||| || | || ||| || ||| Sbjct 393772 GGGATTCCCTCCTTGTCCTGGATTTTGGCCTTGACGTTCTCAATTGAGTCAGAACCTTCG 393713 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || ||||| || || || | ||| || ||||| || ||||| Sbjct 393712 ACCTCAAGTGTGATGGTCTTGCCCGTAAGAGTCTTGACGAAGATCTGCAT 393663 >seq652 Length=32697 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || || | |||||||| || ||||| ||||| || |||||||||||| Sbjct 6660 CCTCCACGAAGACGAAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGTTG 6601 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| |||||||| ||||| || || || | |||||||||||| || || Sbjct 6600 AGAGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCAGGAGGG 6541 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| || | | ||| || ||| || Sbjct 6540 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGAGTCAGAACCTTCGACC 6481 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || ||||| || || || | ||| || || || || ||||| || Sbjct 6480 TCAAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATCTGCATCTT 6431 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | || ||||| || | || |||||||| ||||| || |||||||||||| Sbjct 6890 TTCCACCGCGAAGGCGCAAAACCAAATGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGT 6831 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | || | ||| |||||||| ||||| || || || | |||||||||||| || | Sbjct 6830 TGAGAGTCCGGCCGTCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCAGGAG 6771 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||| || || || || || || ||||| || | | ||| || ||| | Sbjct 6770 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTCTCAATCGAGTCAGAACCTTCGA 6711 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || || ||||| || || || | ||| || || || || ||||| Sbjct 6710 CCTCAAGGGTGATGGTCTTGCCCGTAAGAGTCTTGACAAAGATCTGCAT 6662 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 ||||| || | || || ||||| || |||||||||||| | |||| | || || Sbjct 7098 ACGAGATGCAAAGTTGACTCCTTCTGGATGTTGTAGTCGTTGAGGGTGCGGCCATCCTCA 7039 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| |||||||| | ||||||||||| || || ||||| || || |||||| Sbjct 7038 AGCTGCTTGCCAGCAAAAATAAGTCGCTGCTGATCTGGGGGAATGCCCTCCTTGTCTTGA 6979 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || || | | |||||| ||| || || | |||||| || || Sbjct 6978 ATCTTGGCCTTAACGTTCTCGATCGAATCGGACCCTTCGACTTCCAAAGTAATCGTCTTT 6919 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || | || || || || || |||||| Sbjct 6918 CCAGTAAGGGTCTTCACAAAGATCTGCATT 6889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505388532096240