Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_027994.1 Length=41632 Score E Sequences producing significant alignments: (Bits) Value seq31 630 2e-176 >seq31 Length=5916 Score = 630 bits (698), Expect = 2e-176 Identities = 1003/1429 (70%), Gaps = 51/1429 (4%) Strand=Plus/Minus Query 23563 TCTTCATGTAATTAAGCAACTCTTCCTGTACAGATTTCTTCTCGTCGGTTCGCGCGGCAA 23622 |||||||||| | | || | |||||||| ||| || ||| || ||||| | Sbjct 4613 TCTTCATGTAGTCCATCAGCAGATCCTGTACGCTGCGCTTATCCTCGCGGCGGGCGGCCA 4554 Query 23623 CAACTTCGTCCAGCGTGTCTTTAGCAACGATGTGGTACAGGAACACCGGCCTCTCGTGTC 23682 ||||||||||||||| | || || ||| |||| | ||||||||| | | ||| | Sbjct 4553 GCACTTCGTCCAGCGTGCCCTTGGCCTGGATCAGGTAAATGAACACCGGGCGCGGGTGAC 4494 Query 23683 CTGCCTGTTTCTGGCGGACCGGGCCTATTCGCTCGACAACCTGCAAATAGTGTTCAAGAT 23742 | ||||| ||||||| ||||| || || ||||| || | |||| ||||| |||| | Sbjct 4493 CGGCCTGCATCTGGCGCACCGGACCGATACGCTCCACGATCTGCGCGTAGTGCTCAAAGT 4434 Query 23743 TCCA-GCCTTGCGAGATGAACGCCAGATGGTGTCCGCCGTCCTGTAAATTCAAACCATGA 23801 |||| | | || || || ||||| ||||| ||||| ||||| | || | || || Sbjct 4433 TCCATGTGTCGCT-GAAAAATGCCAGGTGGTGCCCGCCATCCTGCATGTTGAGGCCGTGG 4375 Query 23802 CCGGCTGACGCAGGGTGGACGCACAAAATCTCGATTTCGCCGCGGTTCCATGCTTCCATC 23861 || || ||||| ||||| |||||||| || ||||| | || |||||| || | | Sbjct 4374 CCCGCGGACGCCGGGTGAACGCACAAGATTTCGATCTGACCTTTGTTCCAGCGCTCAACC 4315 Query 23862 TGCTTATTACCCTTAGCACCTTTCGCGAATGCCTGCGCCTGCGGGAAACGTTTCAGGATA 23921 || ||||| ||| || || ||| |||||||||||||||| ||||||| ||| Sbjct 4314 TGGCGGTTACCGGCAGCGCCCTTTTTGAACTCCTGCGCCTGCGGGAACCGTTTCAAGATG 4255 Query 23922 CGCTCCAGTTCGTGCTTGAACTGATAGGCTACCAGTAGCGGAGCACCCTGTAACTCCTCA 23981 ||| |||| ||||||||| |||||||||| |||| ||||| || || ||||| || Sbjct 4254 CGCGCCAGGTCGTGCTTGTACTGATAGGCCACCAACAGCGGGGCGCCGGACAACTCGTCG 4195 Query 23982 ACAATTGACTCCAGCGCATCCAGTTTCGTGTCGTGCACTTTCTCCCAGTCTTTGGTTGCT 24041 | ||| |||||||| || ||||| |||| ||||||||| ||| |||| || | | Sbjct 4194 ATAATCGACTCCAGGGCGTCCAGCTTCGCGTCGTGCACCTTCGCCCACTCGGTAGACCGC 4135 Query 24042 TCTCCGTCTGGCCCTGATACATACACAGCACCAGAAGCAATCTGCAAACACTTTGACGTC 24101 || |||||| || | |||||||| || || || ||||||| || || | || Sbjct 4134 TCGCCGTCTTCGCCGGTCACATACACCGCCCCGCTGGCGATCTGCAGGCATTTGGCGGTA 4075 Query 24102 TTTGCCGCGGCGTTAGCCGCTTCAACTTCTCCGCTTTCCAGTTCCGCGAATAACTTTTCC 24161 ||||| ||||| |||||||| || || ||||| |||||||| ||||||| || |||| Sbjct 4074 CGGGCCGCCGCGTTGGCCGCTTCGACCTCGCCGCTATCCAGTTCGGCGAATAGCTGTTCC 4015 Query 24162 TCCATATCGATGTACGCCTGACGCGCCTTCTTCGGCAGGTCGATTTCAACCGGTACAATA 24221 ||||| || ||||||||| |||||||| |||| |||| | ||||| || | Sbjct 4014 TCCATTTCCTTGTACGCCTTGCGCGCCTTTGGTGGCATATCGACGACGACCGGGACGACG 3955 Query 24222 ATCGGCGCTTCGCAACCAAACCACTCGGCGGCGTCAATCGTGAGACTAATGTCTTTCATC 24281 | ||| || || ||||| ||||||| ||||| | || ||||| | |||||||| Sbjct 3954 ACAGGCTTGTCACAGCCAAAGAACTCGGCCGCGTCCACGGTCAGACTGACGTCTTTCAGT 3895 Query 24282 TTCTGATGAATCTCATTATCCGCACC-CGGTCGTGCGTGATACTCCCGCGCCATCGCGGA 24340 ||||| || ||||| | || ||||| ||| | ||| | || || || || ||| | Sbjct 3894 TTCTGGTGGATCTCGGTGTCGGCACCGCGGCGGGGCGCG-TATTCGCGGGC---GGCGTA 3839 Query 24341 TT--TC-CCTTTCTGTACCGAGTTAAACCAGCGGTCTGTGAATGCCGTGTACGAAGAACC 24397 | || |||||||| |||||| | |||||||| || ||||| || ||||| || Sbjct 3838 ATGATCTCCTTTCTGCACCGAGGTGAACCAGCGATCGGTGAAAGCAGTGTAAGA------ 3785 Query 24398 AAGGCAACCAAGGCGCTCGCCAGCGTCGATAAACCAGTTCTGCCCCCACAAGTCCTTGAG 24457 || || || |||||||| || |||| ||||||||||| ||||||| || ||||| Sbjct 3784 ---GCTGCCGAGACGCTCGCCGGCATCGACGAACCAGTTCTGACCCCACAGATCTTTGAG 3728 Query 24458 GCCGTTCGGCGACGGTGTGCCTGTCAGGTTAATGAAACGCTTAACCTTTCCGAACGCCAC 24517 ||||||||| || || || || ||||| || || || ||||| ||||| |||||||| || Sbjct 3727 GCCGTTCGGTGATGGCGTACCGGTCAGATTGATAAAGCGCTTCACCTTACCGAACGCTAC 3668 Query 24518 TTTGCTTAGCGCCTTAGCCCGTTTGCTTCCTCCAGAACGGCTACGGAAAGATTTCAGCTT 24577 ||| || || | ||| || || ||||| || || || ||| ||||| ||||| ||||| Sbjct 3667 TTTACTGAGTGTCTTCGCGCGCTTGCTACCGCCGGATTTGCTGCGGAACGATTTAAGCTT 3608 Query 24578 CGTGCTCTCATCAGCAACGATAACCGTAAAAGGCCAGTCGTCTTTGCCGTAGTAGTCAAT 24637 ||| ||| || ||||| || || || || ||||| |||| |||||| ||| | | Sbjct 3607 CGTCGACTCGTCGGCAACAATGACGGTGAATGGCCACGCGTC---GCCGTAATAGCCGAC 3551 Query 24638 CAGCCACTCGATAACTTCGTAGTTTGTGCACACCACGTTAGCATCTGACTCCAGCGCCGC 24697 || ||| ||||| || || ||||| |||||||||||| ||| | ||||||||| Sbjct 3550 CAACCAGTCGATCACCTCATAGTTAACGCACACCACGTTGAAATCGTCGTTCAGCGCCGC 3491 Query 24698 GATACGG--CGCTTCTCTGAACCGGTTGCGTCTACGACACTCAGACAGGGGAAGTTCCAA 24755 | ||| || ||| || ||||| |||| ||||| | ||| || ||||| | ||| Sbjct 3490 CAGGCGGTCGGCCTCTTTG--CCGGTGCCGTCCACGACGCGCAGGCATGGGAAATCCCAC 3433 Query 24756 CGTGCCTGTTCCGCGGGCCACGTACCTGACGCAACACGTAAAGGAGCCAGAATTAACACT 24815 ||||||| || ||||| || ||||| ||||| || | || ||||| || | ||| Sbjct 3432 TTCACCTGTTCGGCCGGCCAGGTGCCTGATGCAACGCGCAGCGGCGCCAGGATAAGCACC 3373 Query 24816 CGGTCGTC-GTCATTAAGTT------GCCCA---TTAC-------------GGAACAGCC 24852 || ||| | ||| | |||| |||| || | ||||||| | Sbjct 3372 CGATCGCCGGTC--TGAGTTACCGGGTCCCAATCTTCCAGCTTTGAGGATTGGAACAGGC 3315 Query 24853 GATTGAGAACCCACAACGTTGACCCCGACTTACCGCTGCCCATGCTCGCCCAGATATTGC 24912 | || || ||||| || | ||| | ||| ||| |||||| ||||||| | ||||| Sbjct 3314 GGTTCAGCGTCCACATGGTGGCCCCGGTCTTGCCGGAGCCCATTGTCGCCCACACATTGC 3255 Query 24913 AGCGATGGTGCCGCAGCATGAACGAAGTCATGAGCTTCTGGTATTCGCG 24961 |||| |||| |||||||| | ||||| || || || |||||||| Sbjct 3254 AGCGTGGGTGACGCAGCATATGCCGCGTCATTAGTTTTTGATATTCGCG 3206 Score = 443 bits (490), Expect = 5e-120 Identities = 702/999 (70%), Gaps = 8/999 (1%) Strand=Plus/Minus Query 27805 TAGTACCCACGCGCCAGGTTCTGCGGCTGGAAGCCTTTACCCGCAAATCGTAACGTACGT 27864 |||||||| |||||||||||||||||||||||||||||||| || | || | ||| ||| Sbjct 1184 TAGTACCCGCGCGCCAGGTTCTGCGGCTGGAAGCCTTTACCGGCCCAGCGCAGCGTGCGT 1125 Query 27865 TTAGCTCCACCATACTGGATGCAACCGCGACGGCGGTCGTCAGACGAGCGGCCTAACAGC 27924 ||||| || || ||||| | ||| ||||| ||||| |||| ||| |||| | |||| Sbjct 1124 TTAGCCCCTCCGTACTGCAGGCACCCGCGGCGGCGCCCGTCGCGCGACAGGCCGAGCAGC 1065 Query 27925 AGCGGGTTATATTTCGTTGACGCAGTGGATGCCGCCCCGAGGCGCATTTCTATAATCGTG 27984 ||||| ||||| || || || ||||| ||||| || ||||||||||| || | | | Sbjct 1064 AGCGGAGCGTATTTTGTCGATGCGGTGGACGCCGCGCCCAGGCGCATTTCGATCAGCTCG 1005 Query 27985 CGGGCGTCGTCCGGTAAATCATCGTCAGCAAGCAGGTCGTTAAGCGTTGACTTCTGCGCG 28044 || || |||||||| | || ||| || ||||||||||| ||||| || ||||||||| Sbjct 1004 CGCGCCTCGTCCGGCAGGTCGGGGTCGGCCAGCAGGTCGTTTAGCGTCGATTTCTGCGCG 945 Query 28045 TTGTGGATGCGATGCGCAGGCGCCAGTTCACGCAGAATCGGCAGGAAGTCCTTACCTGTA 28104 || |||| |||||| |||||||| || ||||| ||||||||||| || || Sbjct 944 TTCGGGATTTCATGCGCCGGCGCCAGGTCGCGCAGCGTCGGCAGGAAGGAGGCCCCGGTC 885 Query 28105 AGCGAGCCGCCGTATTTACGTTG--GGCTTCTTCCTGTAACTGTGCCTTGTGTTTCTCCA 28162 || || |||||| | | ||| ||| || |||| | || | |||||| | || Sbjct 884 AGGCCGCTGCCGTACT--CCTTGGTGGCCTCAGCCTGCAGCTCTTGCTTGTGGCGCGTCA 827 Query 28163 CAGCTTCAATTGCGGCTTCCGCCAGCGCAACGTCGACCTTAAACCCGCGGTCGTTAATTA 28222 | || || || || || | |||| | ||||| || || ||||||||||| || | Sbjct 826 CGGCCTCGATCGCTGCCTTGGCCAAGTCGACGTCCACACAGAAGCCGCGGTCGTTGATCA 767 Query 28223 ACTGGTCCAGTTCCAGTACACGGTCTTCGAACTCGGAGTTACCCCAACGCGGCAACTTAT 28282 |||||| ||| |||| | || || ||||| ||| ||||| ||| | | Sbjct 766 GCTGGTCAAGTACCAGGATTTCGTTCTCCTTCTCGGTGTTGCCCCAGGTCGGGATGCGGT 707 Query 28283 GGAACACTTCACGCATCGCGGTGATGTCGCTAACGGCGTACTTGATGAACAGCGCCCACT 28342 |||| || ||||| | ||||||||| ||||||||||||||| ||||||| Sbjct 706 AATACACCTCGCGCATGGACAGGATGTCGCTGCGGGCGTACTTGATGAATTTGGCCCACT 647 Query 28343 CATCCGGGTGCGTTTCAGCAGTGTAGCGGCGAATTTTGTAGTTCTTCGGCGTCGGTTTAG 28402 | || |||||||| | || ||||||||||| | ||||| ||| ||||| || ||| Sbjct 646 CGTCGGGGTGCGTAGCGGCCGTGTAGCGGCGCACCTTGTACGACTTAGGCGTAGGCTTAC 587 Query 28403 AGAAACGCTGAATAAGCGCTTTGCCTCGTTTGTCTTTCGCGTTGTCTGCAGACACGCCAA 28462 |||| || | || ||||| ||||| ||||| || ||||| | || ||||| | Sbjct 586 AGAAGCGGTTGATCAGCGCCTTGCCCGCCTTGTCCTTGGCGTTCTGCTCATCGACGCCTA 527 Query 28463 GCACTTCGCACAATGCGTCGAGTGAACCCGGCAGCGCGTGACGAAACGCCCAAATCATCG 28522 |||| ||| | ||| || || ||||||||||||||| || |||||| ||||| | Sbjct 526 GCACGGTGCATAGTGCATCCAGGCTACCCGGCAGCGCGTGGCGGAACGCCATGATCATGG 467 Query 28523 TATCAATGGTGTT-GCTTACGGGAATATCAAAACCCCAGCAGTGCTTCATGATGAGTCTG 28581 | || | | || || |||| ||||| | |||||||| | ||| | || | | Sbjct 466 TGTCTTCGATATTGGCCGGCGGG-ATATCGTAGCCCCAGCATTCTCGCATCAGCAGCCGG 408 Query 28582 TCGAACATTGAGCCGTTGTGCCACACCA-TCTTAATACGGCTGTTTGGTTTCACCAGACG 28640 ||||||| |||||| ||| |||| || | ||| | | || || |||| Sbjct 407 TCGAACAGCAGGCCGTTCTGCATTACCAGTCGGCTTTCGG-TATCGGGCCTCGCCAGTTC 349 Query 28641 GCGTAACGCGCGGTGCAAATCACCCGGCATGTCGCTGCCGTTGGTGCAATCCCATACCTG 28700 ||| | ||| || | || || | ||||||| |||||||| |||| ||||||||||| Sbjct 348 GCGCAGCGCACGTTTCAGGTCGCGCGGCATGCGGCTGCCGTCGGTGGCGTCCCATACCTG 289 Query 28701 CACAGGCTCGTCGTCAAAAGCATATGTGCAGATTAGAACTTCGGTGGTTGGATGTTCGGC 28760 ||| || ||||| || || || ||||||| | | |||||| | | | ||||| || Sbjct 288 CACCTTTTCATCGTCGAACGCGTAGCTGCAGATCATGATTTCGGTAGATAGGTGTTCCGC 229 Query 28761 GTAAGCGTAGGAGCCGACTTTCTTCAAATCGGCTTCGGA 28799 || || |||| |||| ||| ||||| ||||||||||| Sbjct 228 ATACGCATAGGCGCCGCATTTTTTCAAGTCGGCTTCGGA 190 Score = 279 bits (308), Expect = 1e-70 Identities = 452/638 (71%), Gaps = 18/638 (3%) Strand=Plus/Minus Query 27151 CCCGGATTGCGGATAGCTGCCATAGCTGCGTCTTCAATATCCCGCCAGAAAGCTACTGTT 27210 |||||||| ||| || ||| || |||||||||| |||| ||||||| || ||||| Sbjct 1910 CCCGGATTCTTGATCGCCGCCTGCGCCGCGTCTTCAAGATCCTGCCAGAATGCCACTGTC 1851 Query 27211 TCCGGGTGTGACTCACGCCACATACGCTTGATAGCGTCGCAGGTACGCCACACTTTCTTA 27270 |||||||| ||||| |||||||| |||||||||||||||||||| |||||| || Sbjct 1850 TCCGGGTGCGACTCGCGCCACATGCGCTTGATAGCGTCGCAGGTCATCCACACCTTGCGC 1791 Query 27271 TCAAGAATATAAGATGGTCGGTCATCATT-TTCACCTGGACGTGGTGGTCGCTTGG-CTT 27328 || || ||||||||||| | || || ||| ||| | ||||| ||| Sbjct 1790 GGCAGGTCGTACGATGGTCGGTCGGCTTTCTTGCCCTT----TGGCGCGCGCTTATTCTT 1735 Query 27329 C--CTGAATACGCGCCCACTCATATCCACGTGCG-GTAGCAGCCCAGATGTGGTCGGGGA 27385 | |||||| || || | || | || || ||| | || ||||| ||||| || |||| Sbjct 1734 CTCCTGAATGCGGGCGAATTCGAAGCCGCG-GCGCGCGGCGGCCCAAATGTGATCCGGGA 1676 Query 27386 AAGTCCCGTCCATTGTTTTTGTCATATCAACAAGGTCAAGGCCGAGGTTCTTGGCGAACT 27445 | || || ||||| || | ||| | ||||| ||||||||||| |||||||||| Sbjct 1675 ATGTGCCATCCATGTCTTGCGCCATCTGGTACAGGTCGAGGCCGAGGTTTTTGGCGAACT 1616 Query 27446 GTACGAATGCGCCGACACCCC-CCGC-GTAGCCAAGTCCAAGTTCGCATGCCTTACCAAT 27503 | | ||| ||||| |||||| |||| ||| || || || |||||||| ||||| || || Sbjct 1615 GCAGGAA--CGCCGCCACCCCGCCGCCGTACCCCAGGCCGAGTTCGCAGGCCTTGCCGAT 1558 Query 27504 CTGGCGTAAGTCTTTACGTTCTTTCTTAATGTAATCCGGCTCCATGCCGAACATCTTGCC 27563 ||| |||| |||||| || | | ||| || | | || || | || |||||||||||| Sbjct 1557 CTGCCGTAGGTCTTTGCGATTCTCCTTGATAAAGCCGGGGTCGAGGCGGAACATCTTGCC 1498 Query 27564 TGCGGTTACGCAGTAAATATCCAG---CCCGGCACGGAACGTATCAAGCGCGGTTTCTTC 27620 || ||| ||||||| || || | | | ||| || || || || | ||| Sbjct 1497 GGCCGTTTCGCAGTAGATGTCGCGTTTTTTGTCGGAGAAGACGTCCAGAGCTGTATGTTC 1438 Query 27621 GCCAGCCAGCCACGCCAAACCGCGGCCTTCAACGTTCGAGTAGTCGGCGACGACAAACTT 27680 ||| | | ||| |||| ||||| ||||| ||||| || |||||||| || || || || Sbjct 1437 GCCCGAAATCCAGGCCAGCCCGCGCCCTTCCACGTTTGAATAGTCGGCAACAACGAATTT 1378 Query 27681 ATGTCCGGCTTCCGGGATAATGCAGCTGCGAACCGTAGATGCCGTTAGCTTGGCTACATC 27740 || || ||| |||| |||||| || || || | ||| | ||||||||||| || Sbjct 1377 ATTACCTTTTTCAGGGACAATGCATGATCGCACGGTGGTTGCGGCCAGCTTGGCTACGTC 1318 Query 27741 AAAACGGCGATGTGCTCGGCCCTTAAGTA-ATGCTGAA 27777 ||||| ||||| || ||||| || || | ||||||| Sbjct 1317 GAAACGTCGATGCGCGCGGCCTTTCAGCAGCTGCTGAA 1280 Score = 120 bits (132), Expect = 8e-23 Identities = 184/258 (71%), Gaps = 6/258 (2%) Strand=Plus/Minus Query 26018 ACTATAATAGCTAGCTATTAGGTCGTCAACCTGT--TTAAACGAACCAACGACAAAAACA 26075 |||||||||| | || |||||| ||||||||| || | || ||| ||| ||| Sbjct 2756 ACTATAATAGTTTGCGATTAGGCTGTCAACCTGCGATTTGCTG--CCGACGGTAAACACA 2699 Query 26076 TTCGCACCACGTTTACGCATCCGCTCATGTTCCCGTAGCTGGTGCGGGTCTGGCTTCGTG 26135 || || || || || |||| || || || || ||| |||||||||||||| ||| Sbjct 2698 TTGGCGCCGCGCTTTTGCATGCGTTCGTGCTCGCGTGCCTGGTGCGGGTCTGTGCCGGTG 2639 Query 26136 TTCTCGTCTTTCTTAACCTCGACGAACCAGACTATGCCGCCGGGGAGAATTACCAGCAGG 26195 |||||||||||| |||||||||||||| || | ||| | || |||| |||||||| Sbjct 2638 GCCTCGTCTTTCTTCACCTCGACGAACCACACGACGCCTCTCGGCAGAAGCACCAGCAGA 2579 Query 26196 TCTGGGGCGCCGGAACGCCCCTCGTAGGAGAGTTTGCGAACGAGGCCGCCAAGGGCCTCG 26255 || ||| || ||||||||||| || ||| | || ||| |||| || ||| Sbjct 2578 TCGGGGCACCCATTGCGCCCCTCGTATCGGATTTTTCTTACCAGGGCGCCGAGCTTCTCA 2519 Query 26256 AA-TCGGTCTTTTGCGTA 26272 || |||| |||| ||||| Sbjct 2518 AACTCGG-CTTTGGCGTA 2502 Score = 87.8 bits (96), Expect = 5e-13 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 26848 GCCAACAAATCACGGCACAGCGCCTGAGTGCAGTTTTCCACGAGTTTACCGGAATATGTG 26907 |||| ||| || |||||||||||||| | ||||||| | || || ||| || ||| Sbjct 2276 GCCAGCAAGTCGCGGCACAGCGCCTGCACGATGTTTTCCGCCAGCTTGCCGCCGTAGGTG 2217 Query 26908 TACTGGAAGCCCCACTGACGGGTTAACTGGTTTTCGCCCTGGTACTTGATGCG 26960 |||| |||||||||| || || |||||| ||||||||||| |||||||| Sbjct 2216 AACTGCCAGCCCCACTGCCGTGTGGTCTGGTTCTCGCCCTGGTATTTGATGCG 2164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133098331146536