Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1443 89.7 6e-13 >seq1443 Length=914762 Score = 89.7 bits (98), Expect = 6e-13 Identities = 128/178 (72%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 181805 GTCTTTACCACCCATGAGACGCGTACCAAATTGACCACATGGCTCAAGAAGGTTAATGTT 181864 ||| || || ||| |||||| ||||| ||||||||| ||| |||||||| ||||| Sbjct 365678 GTCCTTTCCTCCCTGGAGACGTGTACCGAATTGACCAATGGGCAGCAGAAGGTTGATGTT 365737 Query 181865 GTTTGAACCTGTATAGTCGTTGGCCAACTTAACGATGGT-ATCCGCAAGGGACACTTCAC 181923 ||| || || ||||| | |||||| || || ||||| ||| || | || || | Sbjct 365738 GTTAGAGCCGACGTAGTCCTGGGCCAAGTTCACAATGGTCATCATTAAAG-ACTGCTCGC 365796 Query 181924 CGTGGTGGTAAGCTGACTTGTCCGCAACATATGCCGCCAACTGTGCCACCTTCATTTC 181981 ||||||||||||| ||| | || | || | |||| ||| |||||||||| ||| Sbjct 365797 CGTGGTGGTAAGCGGACATCTCGCCGACCGCACCGGCCAGCTGCGCCACCTTCACTTC 365854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628019737675200