Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq887 84.2 3e-11 >seq887 Length=33483 Score = 84.2 bits (92), Expect = 3e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 14237 CCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACTTCA 14296 ||||||||||| |||||||| ||||| | ||| || || ||| | | |||| || Sbjct 22783 CCGACGGCGTCGATTTCATCAATGAACAGGATGCAGGGCGAATTCTTTCTGGCAGTGGCA 22724 Query 14297 AAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCGGCG 14356 || || || || || | | ||| || || ||||||||||||| || | || || Sbjct 22723 AACATGTCGCGGACACGGGCCGGACCTACGCCGACAAACATCTCCAAGAATTCGGATCCG 22664 Query 14357 -GAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTT 14415 ||| | |||||| || || || | ||| || || |||| ||||||||| ||||| Sbjct 22663 CTAACGGT-GATGAAAGGCACATTGGCTTCTCCTGCCGTGGCCTTGGCGAGGAGAGTCTT 22605 Query 14416 CCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACC 14448 ||||| ||||| || | ||||| |||||| Sbjct 22604 ACCCGTACCTGGAGGACCGGTGAGAATGGCACC 22572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618423125052720