Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_028695.2 Length=40491 Score E Sequences producing significant alignments: (Bits) Value seq31 612 5e-171 >seq31 Length=5916 Score = 612 bits (678), Expect = 5e-171 Identities = 958/1357 (71%), Gaps = 34/1357 (3%) Strand=Plus/Minus Query 28093 GCCTGAATCTGATAAACAAATACTGGTCTGGGGTGGTTAGCTTGCATTTGGCGTACAGGC 28152 ||||| ||| | |||| || || || | ||||| || ||||| ||||| || || Sbjct 4530 GCCTGGATCAGGTAAATGAACACCGGGCGCGGGTGACCGGCCTGCATCTGGCGCACCGGA 4471 Query 28153 CCAATACGTTCGATAACCTGCGCATAGTGCTCGTAATTCCACGTCATCGAATAGAAG-GC 28211 || ||||| || | | |||||| |||||||| | ||||| || ||| | || || Sbjct 4470 CCGATACGCTCCACGATCTGCGCGTAGTGCTCAAAGTTCCATGTG-TCGCTGAAAAATGC 4412 Query 28212 CAGGTGACACCCGCCGTCCTGAAGGTTGAGGCCATGGCCGGCTGATGCCGGGTGAACCAG 28271 |||||| |||||| ||||| | ||||||||| ||||| || || ||||||||||| Sbjct 4411 CAGGTGGTGCCCGCCATCCTGCATGTTGAGGCCGTGGCCCGCGGACGCCGGGTGAACGCA 4352 Query 28272 CAGCATAGGAATCTCGCCACGGTTCCAGGCGTCAATCTGGTCGTTGCCTCTCTTACCCTT 28331 || || |||| || ||||||| |||| |||| ||| || ||||| Sbjct 4351 CAAGATTTCGATCTGACCTTTGTTCCAGCGCTCAACCTGGCGGTTACCGGCAGCGCCCTT 4292 Query 28332 CGCCAGCGCTACGGCTTCCGGGAATTTCTTCAGGATGCGGGCGCGGTCATGCTGGAACTG 28391 | | | || | |||||| |||| |||||| || |||| |||| | |||| Sbjct 4291 TTTGAACTCCTGCGCCTGCGGGAACCGTTTCAAGATGCGCGCCAGGTCGTGCTTGTACTG 4232 Query 28392 GTAGGCCACCAGGAGCGGTGCGCCGTTAAGCTCGTC-ATATATCGAGTCCAAGGCCTCCA 28450 |||||||||| ||||| |||||| | |||||| ||| ||||| |||| ||| |||| Sbjct 4231 ATAGGCCACCAACAGCGGGGCGCCGGACAACTCGTCGATA-ATCGACTCCAGGGCGTCCA 4173 Query 28451 GCTTCGCGTTGTGGATAGCTTC--CCACTCTTTGGTTGGCTCTCCGTCGTCGCCCGTTGT 28508 ||||||||| ||| | |||| |||||| | | |||| ||||| ||||| || Sbjct 4172 GCTTCGCGTCGTGCAC--CTTCGCCCACTCGGTAGACCGCTCGCCGTCTTCGCCGGTCAC 4115 Query 28509 ATAGACCGCGCCGCTGGCTATTTGCAGACATTTCTGTGTGCGTGCTGCCGCGTTCGCCGC 28568 ||| ||||| |||||||| || ||||| ||||| || || || |||||||| ||||| Sbjct 4114 ATACACCGCCCCGCTGGCGATCTGCAGGCATTTGGCGGTACGGGCCGCCGCGTTGGCCGC 4055 Query 28569 TTCCACCTCTCCGGCTTCGAGCTGGGCGAAAAGTTTCTTCTCCATCTGGTCATAGGCTTT 28628 ||| ||||| ||| || || | |||||| || | | |||||| | | || || || Sbjct 4054 TTCGACCTCGCCGCTATCCAGTTCGGCGAATAGCTGTTCCTCCATTTCCTTGTACGCCTT 3995 Query 28629 ACGGGCCTTCGGCGGCAGCGGGACAACTACCGGAACCACAACCGGCTTATCACAACCAAA 28688 || ||||| || |||| ||| || ||||| || || || ||||| ||||| ||||| Sbjct 3994 GCGCGCCTTTGGTGGCATATCGACGACGACCGGGACGACGACAGGCTTGTCACAGCCAAA 3935 Query 28689 GTATTCCGCCGCGTCCACGGTAAGA--GA--TATATCAGCTATGCGCTGGTGAATCTCAG 28744 | | || |||||||||||||| ||| || | | |||| | |||||| ||||| | Sbjct 3934 GAACTCGGCCGCGTCCACGGTCAGACTGACGTCTTTCAGTT----TCTGGTGGATCTCGG 3879 Query 28745 TGTCCGCGCCAGAGCGAGGCTTATATGATTTAGCGGCATGATGCGCGCCCTCCTGAACAC 28804 |||| || || ||| ||| ||| ||||| | ||| | || | ||| || Sbjct 3878 TGTCGGCACCGCGGCGGGGCGCGTATTCGCGGGCGGCGTAATGATCTCCTTTCTGCACCG 3819 Query 28805 TGACGAACCAACGGTCGGTGAATGACTGGTAGCTGCTGCCGAGGCGCTGGCCGGCGTCTA 28864 | |||||| || |||||||| | ||| ||||||||| |||| |||||| || | Sbjct 3818 AGGTGAACCAGCGATCGGTGAAAGCAGTGTAAGAGCTGCCGAGACGCTCGCCGGCATCGA 3759 Query 28865 GGAACCAGCACTGGCCCCACAGGTCCTTCAGGCCGTTCGGCGCGGGCGTACCGGTCAGAT 28924 ||||||| ||| |||||||| || || ||||||||||| | |||||||||||||||| Sbjct 3758 CGAACCAGTTCTGACCCCACAGATCTTTGAGGCCGTTCGGTGATGGCGTACCGGTCAGAT 3699 Query 28925 TGATGAAGCGCTTAATCTTCTTGTGCGCCACCTTGCCGAGGGCCCGGGCGCGCTTGCTAC 28984 |||| |||||||| | ||| | ||| || || | ||| | | ||||||||||||| Sbjct 3698 TGATAAAGCGCTTCACCTTACCGAACGCTACTTTACTGAGTGTCTTCGCGCGCTTGCTAC 3639 Query 28985 CGCC---TTTACTACGGAACGACTTCAGCTTGGTCGATTCATCGGCAACGATGACAGTGA 29041 |||| ||| || |||||||| || ||||| ||||| || |||||||| ||||| |||| Sbjct 3638 CGCCGGATTTGCTGCGGAACGATTTAAGCTTCGTCGACTCGTCGGCAACAATGACGGTGA 3579 Query 29042 ACGGCCAGCGGTCGCCCCAGAACTCGACGAGCCACTCCAGAATGTCGTAGTTGCAGCACA 29101 | ||||| |||||| | | |||| | ||| || | | || ||||| ||||| Sbjct 3578 ATGGCCACGCGTCGCCGTAATAGCCGACCAACCAGTCGATCACCTCATAGTTAACGCACA 3519 Query 29102 CCACGTTAGCGTCGTCGTTCAACATCACATCCTCCCGATACTGGCGGC-----TGCCGGT 29156 ||||||| |||||||||| | || || | | | |||| ||||||| Sbjct 3518 CCACGTTGAAATCGTCGTTCAGC------GCCGCC--AGGCGGTCGGCCTCTTTGCCGGT 3467 Query 29157 GCCGTCGACGACGCGCAGTGCCGGGAATTGCCACTTAACCTGTTCGGCGGGCCATGTGCC 29216 |||||| ||||||||||| ||||| | |||||| ||||||||||| ||||| ||||| Sbjct 3466 GCCGTCCACGACGCGCAGGCATGGGAAATCCCACTTCACCTGTTCGGCCGGCCAGGTGCC 3407 Query 29217 GGACGCAACGCGCAGTGGGGCCAGCACCAGCACCCGGTCGCCACAC-CAGTTCTCCTGGT 29275 || ||||||||||| || ||||| | |||||||| ||||| | |||| || ||| Sbjct 3406 TGATGCAACGCGCAGCGGCGCCAGGATAAGCACCCGATCGCCGGTCTGAGTT-ACCGGGT 3348 Query 29276 CCCAGTCGTCCAGGATGCCGGTCTGGAACATCTTGTTCAGCGCCCACATCGTCGCGCCGG 29335 |||| || ||||| | || ||||||| |||||||| |||||| || || |||| Sbjct 3347 CCCAATCTTCCAGCTTTGAGGATTGGAACAGGCGGTTCAGCGTCCACATGGTGGCCCCGG 3288 Query 29336 TCTTCCCGGAACCCATCGTCGCGAATACGTTGCAACGGGGATGGTTAATGATGTGCGCCG 29395 |||| ||||| ||||| ||||| | || ||||| || || || | || ||| || Sbjct 3287 TCTTGCCGGAGCCCATTGTCGCCCACACATTGCAGCGTGGGTGACGCAGCATATGCCGCG 3228 Query 29396 TGATGGGCTTCTGGTAAGGGCGTCGTTCGAATCTCAT 29432 | || | || || || ||| || | ||||||||| Sbjct 3227 TCATTAGTTTTTGATATTCGCGACGCTGGAATCTCAT 3191 Score = 408 bits (452), Expect = 1e-109 Identities = 564/784 (72%), Gaps = 10/784 (1%) Strand=Plus/Minus Query 32195 TAGCCACGGGCAAGGTTCTGCGGCTGGAAACCTTTTCCGGCAAATCGTAAGGTTCTCGAC 32254 || || || || ||||||||||||||||| ||||| ||||| | || | || | Sbjct 1181 TACCCGCGCGCCAGGTTCTGCGGCTGGAAGCCTTTACCGGCCCAGCGCAGCGTGCGTTTA 1122 Query 32255 GCCCCGCCATATTGCAGGCACCCGCGACGGCGGCCGTCGCCAGACAGGCCGAGCAGGAGC 32314 ||||| || || |||||||||||||| ||||| ||||||| |||||||||||||| ||| Sbjct 1121 GCCCCTCCGTACTGCAGGCACCCGCGGCGGCGCCCGTCGCGCGACAGGCCGAGCAGCAGC 1062 Query 32315 GGGTTATATTTGGTTGATGCCGTGGAGCTGGCTCCGAGGCGCATTTCTATAATTGTCCGG 32374 || ||||| || ||||| ||||| || || ||||||||||| || | || Sbjct 1061 GGAGCGTATTTTGTCGATGCGGTGGACGCCGCGCCCAGGCGCATTTCGATCAGCTCGCGC 1002 Query 32375 GCGTCATCCGGCAGGTCATCGTCGGCCAGCAGGTCGTTAAGCGTTGATTTCTGCGCGTTG 32434 || || ||||||||||| |||||||||||||||||| ||||| |||||||||||||| Sbjct 1001 GCCTCGTCCGGCAGGTCGGGGTCGGCCAGCAGGTCGTTTAGCGTCGATTTCTGCGCGTTC 942 Query 32435 AGAATCTCGTGCGCCGGGGCCAGGTCGCGCAGTGTTGGCAGGAACGCGGCACCGGTCAGG 32494 | || || |||||||| |||||||||||||| || |||||||| | ||| ||||||||| Sbjct 941 GGGATTTCATGCGCCGGCGCCAGGTCGCGCAGCGTCGGCAGGAAGGAGGCCCCGGTCAGG 882 Query 32495 CCAGCGCCCCATTTCTCGTTTGCTTCAGCTTGTAGTTCTATTTTATGCTGTTTAACAGCA 32554 || ||| | | || | | || ||||| || || ||| || || | | || || Sbjct 881 CCGCTGCCGTACTCCTTGGTGGCCTCAGCCTGCAGCTCTTGCTTGTGGCGCGTCACGGCC 822 Query 32555 TCAATTGCTGCGTTGGCCAGGGCAGTGTCGACGAAAAATCCACGGTCGTTGATGCGCTGG 32614 || || ||||| ||||||| | | ||| || | || || ||||||||||| ||||| Sbjct 821 TCGATCGCTGCCTTGGCCAAGTCGACGTCCACACAGAAGCCGCGGTCGTTGATCAGCTGG 762 Query 32615 TCGATTGCCAGCACCGTGTTTTCAAATTCGATGTTGCCCCAGTCCGGCATGGCGTGGAAT 32674 || | | |||| | ||| || ||| ||||||||||| ||| ||| || | Sbjct 761 TCAAGTACCAGGATTTCGTTCTCCTTCTCGGTGTTGCCCCAGGTCGGGATGCGGTAATAC 702 Query 32675 ACCCCGCGCATTGCCGTAATATCCGAGCGCGCGTATTCGATGAACTCGGCCCATTCCGCC 32734 ||| ||||||| | | || || ||| ||||| | |||||| | |||||| || | Sbjct 701 ACCTCGCGCATGGACAGGATGTCGCTGCGGGCGTACTTGATGAATTTGGCCCACTCGTCG 642 Query 32735 GGGTGCGTTTC--CCGTGAGTACCGGCGCACCTTGTAGTTTTTCGGTGTCGGCTTACAGA 32792 |||||||| | ||||| || |||||||||||||| || || || |||||||||| Sbjct 641 GGGTGCGTAGCGGCCGTG--TAGCGGCGCACCTTGTACGACTTAGGCGTAGGCTTACAGA 584 Query 32793 AACGCTGAATAAGCGCCTTGCCACGCTTGTCCTTCGC---CAGACTGTCGTCGATTTGCA 32849 | || | || ||||||||||| ||||||||| || | | ||| || | || Sbjct 583 AGCGGTTGATCAGCGCCTTGCCCGCCTTGTCCTTGGCGTTCTGCTCATCGACGCCTAGC- 525 Query 32850 ACACTTCGCACTGCATAGCCAGACTACCCGGCAGCGAGTGGCGGAACGCCATTACCATCG 32909 || | | | ||||| |||| ||||||||||||| ||||||||||||||| | ||| | Sbjct 524 ACGGTGCATAGTGCAT--CCAGGCTACCCGGCAGCGCGTGGCGGAACGCCATGATCATGG 467 Query 32910 TGTCGAGGATATCGCGCGGGTCAATATGGAAGTCCCATACGTTTTTAAGCAGCAGCCTGT 32969 |||| ||||| | ||| |||| | || |||| | | | |||||||| || Sbjct 466 TGTCTTCGATATTGGCCGGCGGGATATCGTAGCCCCAGCATTCTCGCATCAGCAGCCGGT 407 Query 32970 CGAA 32973 |||| Sbjct 406 CGAA 403 Score = 224 bits (248), Expect = 3e-54 Identities = 441/648 (68%), Gaps = 7/648 (1%) Strand=Plus/Minus Query 31516 GGCACCAGCCCAATACGCTTTACCTGGATTCTTAATCGCCGCCATTGCGCCA--TCTTCT 31573 ||| ||||||||| |||| || |||||||| ||||||||| |||||| ||||| Sbjct 1932 GGCGCCAGCCCAAAACGCGCGTCCCGGATTCTTGATCGCCGCC--TGCGCCGCGTCTTCA 1875 Query 31574 AACTCTCGCCAGAATCGGATTGTTGCCGGGTGGGATTCTCGCCACATTCTTTTAATAGAG 31633 | || |||||||| | ||| ||||||| || || |||||||| | || |||| | Sbjct 1874 AGATCCTGCCAGAATGCCACTGTCTCCGGGTGCGACTCGCGCCACATGCGCTTGATAGCG 1815 Query 31634 TCGCATGTGAGCCATACATTTTTCGGAAGGTCGTAAGACGGTCTTTCCGCCTTCTGGCCG 31693 ||||| || | ||| || || ||| |||||||| || |||| || || |||| ||| Sbjct 1814 TCGCAGGTCATCCACACCTTGCGCGGCAGGTCGTACGATGGTCGGTCGGCTTTCTTGCCC 1755 Query 31694 CCAAAACCTTTCTTATTCTTTTCCTGGATACGCGCATATTCATACCCCTTTTTCGCACCG 31753 | ||||||||| ||||| || || || |||| | || ||| || Sbjct 1754 TTTGGCGCGCGCTTATTCTTCTCCTGAATGCGGGCGAATTCGAAGCCGCGGCGCGCGGCG 1695 Query 31754 GCCCAGATATGGTCCGGGAAGGTTCCTTTCATCATTTCGGCCATGCCGTGCAGGTCAAGC 31813 ||||| || || |||||||| || || | ||| || ||||| || |||||| || Sbjct 1694 GCCCAAATGTGATCCGGGAATGTGCCATCCATGTCTTGCGCCATCTGGTACAGGTCGAGG 1635 Query 31814 CCCGTCACTTTAGCCATGTTTACGAACGCACCGACGCCACCCGAATAGCCGAGCGCCAAT 31873 || ||| || | | | |||||| | || || || || || || | | | Sbjct 1634 CCGAGGTTTTTGGCGAACTGCAGGAACGCCGCCACCCCGCCGCCGTACCCCAGGCCGAGT 1575 Query 31874 TCGCAGGTCTTACCTATCTGTCTCAAATCCTTACGGTTTTTCTTGATGTAGTCCGGCTCC 31933 ||||||| ||| || ||||| | | || || || || | |||||| || | || || Sbjct 1574 TCGCAGGCCTTGCCGATCTGCCGTAGGTCTTTGCGATTCTCCTTGATAAAGCCGGGGTCG 1515 Query 31934 ATGCCGAACATCTTACCCGCAGTTACGCAGTAAATATCAAGCCCT--GACCG-GAAGGTT 31990 | || ||||||||| || || ||| ||||||| || || | | | | | |||| Sbjct 1514 AGGCGGAACATCTTGCCGGCCGTTTCGCAGTAGATGTCGCGTTTTTTGTCGGAGAAGACG 1455 Query 31991 TCCAGTGCGGTTTCTTCCCCCGCGAGCCAGGCCAGACCGCGCCCTTCTACGTTGGAGTAG 32050 ||||| || || | ||| |||| | ||||||||| ||||||||||| ||||| || ||| Sbjct 1454 TCCAGAGCTGTATGTTCGCCCGAAATCCAGGCCAGCCCGCGCCCTTCCACGTTTGAATAG 1395 Query 32051 TCGGCAACAACTAACTGCTTGCCTGGCTCCGGGATGATGCAGCTACGAACCGTTGATGCC 32110 ||||||||||| || | || ||| || |||| ||||| || || || | ||| Sbjct 1394 TCGGCAACAACGAATTTATTACCTTTTTCAGGGACAATGCATGATCGCACGGTGGTTGCG 1335 Query 32111 GTAAGTTTGGCTACGTCGTAGGCCCAGTGCGCCCGGCCTTTGAGAAGC 32158 | || |||||||||||| | | ||||| |||||||| || ||| Sbjct 1334 GCCAGCTTGGCTACGTCGAAACGTCGATGCGCGCGGCCTTTCAGCAGC 1287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129447198871732