Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_028698.1 Length=41868 Score E Sequences producing significant alignments: (Bits) Value seq31 531 1e-146 >seq31 Length=5916 Score = 531 bits (588), Expect = 1e-146 Identities = 906/1298 (70%), Gaps = 48/1298 (4%) Strand=Plus/Plus Query 8302 CGCGAGTACCAGAAGCTGATGACTTCGTTCATGTTGCAGCACCCCCGCTGCAATATATGG 8361 ||||| || || || || ||||| | ||| ||| ||||| ||||||||| | ||| Sbjct 3206 CGCGAATATCAAAAACTAATGACGCGGCATATGCTGCGTCACCCACGCTGCAATGTGTGG 3265 Query 8362 GCTTCGATGGGCGCAGGCAAAAGTTCCGCAACGATGTGGGTGCTTAACCGCCTGTTTCG- 8420 || | |||||| | ||||| | || || |||||| ||| ||||||||||| | Sbjct 3266 GCGACAATGGGCTCCGGCAAGACCGGGGCCACCATGTGGACGCTGAACCGCCTGTTCCAA 3325 Query 8421 ----CAATG--GGCAGCTCA----CCGAAGA---AGACCGC-------GTGTTAATCCTT 8460 ||| | || || | ||| | |||||| ||| | ||||| Sbjct 3326 TCCTCAAAGCTGGAAGATTGGGACCCGGTAACTCAGACCGGCGATCGGGTGCTTATCCTG 3385 Query 8461 GCCCCATTACGTGTTGCATCCGGTACGTGGCCGGCGGAACAAGAGAAATGGCAATTCCCT 8520 || || | || |||||||| || || |||||||| ||||| | ||| ||| | ||||| Sbjct 3386 GCGCCGCTGCGCGTTGCATCAGGCACCTGGCCGGCCGAACAGGTGAAGTGGGATTTCCCA 3445 Query 8521 TGTCTTCGTGTCATCGATGCAACCGGTTCGGAGAAGCG--CCGCATAGCGGCGCTGGAGT 8578 || || || ||| | || | ||||| | ||| || |||| | ||||||||| | Sbjct 3446 TGCCTGCGCGTCGTGGACGGCACCGG--CAAAGAGGCCGACCGCCTGGCGGCGCTGAAC- 3502 Query 8579 CAGACGCT---AACGTAGTATGCACTAACTACGAAGTTATCGAATGGCTCATTGACTACT 8635 |||| | ||||| || ||| |||||| || || ||||| ||| | | | ||| | Sbjct 3503 --GACGATTTCAACGTGGTGTGCGTTAACTATGAGGTGATCGACTGGTTGGTCGGCTATT 3560 Query 8636 ACGGCAAAGATGACTGGCCTTTTACGGTTATAGTTGCCGATGAAAGCACGAAGCTCAAAT 8695 ||||| || | ||||| || || || || |||||||| || |||||||| |||| Sbjct 3561 ACGGC---GACGCGTGGCCATTCACCGTCATTGTTGCCGACGAGTCGACGAAGCTTAAAT 3617 Query 8696 CGTTCCGCAGCCGTTCCGGGGGGAGCAAGCGGGCTAAGGCTCTCAGCAAAGTGGCGTTCG 8755 ||||||||||| ||||| || |||||||| || ||| | ||||| ||||| ||||||| Sbjct 3618 CGTTCCGCAGCAAATCCGGCGGTAGCAAGCGCGCGAAGACACTCAGTAAAGTAGCGTTCG 3677 Query 8756 GGAAGGTTAAGCGTTTCATTAACCTGACCGGCACACCATCACCTAACGGCTTAAAAGATT 8815 | ||||| ||||| || || || |||||||| || |||||||| |||||| | |||||| Sbjct 3678 GTAAGGTGAAGCGCTTTATCAATCTGACCGGTACGCCATCACCGAACGGCCTCAAAGATC 3737 Query 8816 TGTGGGGTCAGAACTGGTTTATCGACGCAGGTGAGCGCCTTGGTTCTTCGTACACCGCAT 8875 ||||||||||||||||||| |||| || || ||||| || || || ||||| || | Sbjct 3738 TGTGGGGTCAGAACTGGTTCGTCGATGCCGGCGAGCGTCTCGGCAGCTCTTACACTGCTT 3797 Query 8876 TCACCGACCGCTGGTTTAACTCGGTACAGAAAGGAAA--AT--CGGCGATGGCGCGTGAG 8931 ||||||| |||||||| | |||||| ||||||||| | || || | || || || Sbjct 3798 TCACCGATCGCTGGTTCACCTCGGTGCAGAAAGGAGATCATTACGCC----GCCCGCGAA 3853 Query 8932 TATCACGCACGTCCG-GGCGCAGATAATGAGATTCACCAGAAAATGAAGGATATCAGTCT 8990 || | ||| | ||| || || || | ||||| ||||||||| |||| || ||||||| Sbjct 3854 TA-CGCGCCCCGCCGCGGTGCCGACACCGAGATCCACCAGAAACTGAAAGACGTCAGTCT 3912 Query 8991 CACGATTGACGCTGCTGAATGGTTCGGATGTGAAGCGCCTATTATCGTGCCTGTAGAAAT 9050 || | ||||| || || | || || ||||| |||| | |||| || || | | Sbjct 3913 GACCGTGGACGCGGCCGAGTTCTTTGGCTGTGACAAGCCTGTCGTCGTCCCGGTCGTCGT 3972 Query 9051 CGACCTGCCTAAGAAAGCGCGTCAAGCCTACATTGACATGGAAGAGAAGTTATTCGCTGA 9110 ||| |||| || ||||| | || |||| || ||||| || || ||||||| || Sbjct 3973 CGATATGCCACCAAAGGCGCGCAAGGCGTACAAGGAAATGGAGGAACAGCTATTCGCCGA 4032 Query 9111 ACTGGAAAGCGGAGAAGTTGAAGCGGCTAATGCCGCCGCTAAAACGTCAAAGTGTTTGCA 9170 |||||| ||||| || || |||||||| || || || || || | || || |||| Sbjct 4033 ACTGGATAGCGGCGAGGTCGAAGCGGCCAACGCGGCGGCCCGTACCGCCAAATGCCTGCA 4092 Query 9171 GATTGCATCAGGGGCTGTGTATGTGTCGGGGCCAGATGGCGAGGCAACGAAAGACTGGGA 9230 ||| || ||||| ||||||||| | || ||| |||||| | | || |||| Sbjct 4093 GATCGCCAGCGGGGCGGTGTATGTGACCGGCGAAGACGGCGAGCGGTCTACCGAGTGGGC 4152 Query 9231 GAAAGTGCACGACACGAAACTGGACGCACTGGAGTCAATTGTGGAGGAGTTGCAGGGTGC 9290 ||| ||||||||| |||| |||||||| |||||||| ||| | || |||||| || || Sbjct 4153 GAAGGTGCACGACGCGAAGCTGGACGCCCTGGAGTCGATTATCGACGAGTTGTCCGGCGC 4212 Query 9291 GCCGTTGCTGGTGGCGTATCAGTTTAAGCACGAACTTGAGCGCATTCTTAAGCGTTTCCC 9350 ||| || ||||||| ||||||| |||||||| || | |||||| | || || ||||| Sbjct 4213 CCCGCTGTTGGTGGCCTATCAGTACAAGCACGACCTGGCGCGCATCTTGAAACGGTTCCC 4272 Query 9351 ACAGGCGCAGGCGTTCGCCAAAGGTGCCAAGGGCAATAAGCAGATGGAAGCG-TGGAACC 9409 |||||||||| |||| || || || || || ||| | | |||| |||||| Sbjct 4273 GCAGGCGCAGGAGTTCAAAAAGGGCGCTGCCGGTAACCGCCAGGTTG-AGCGCTGGAACA 4331 Query 9410 GCGGAGAGATACCTATGCTCCTG-ATACACCCAGCCTCCGCGGGTCACGGGCTGTCGCTA 9468 || |||| | | || || | ||||| || |||||||| ||||| || | Sbjct 4332 AAGGTCAGAT-CGAAATCTTGTGCGTTCACCCGGCGTCCGCGGGCCACGGCCTCAACATG 4390 Query 9469 CAACACGGCGGGCACCACATGGCCTTTATGAGTCAGGGGTGGAACCTGGAACATTATCTG 9528 || | |||||||||||| |||| ||| | || | |||||| | || || || | Sbjct 4391 CAGGATGGCGGGCACCACCTGGCATTTTTCAGCGACACATGGAACTTTGAGCACTACGCG 4450 Query 9529 CAGGTTATCGAGCGCATAGGTCCGGTAAGGCAGATGCA 9566 ||| | | ||||| || |||||||| | |||||||| Sbjct 4451 CAGATCGTGGAGCGTATCGGTCCGGTGCGCCAGATGCA 4488 Score = 407 bits (450), Expect = 4e-109 Identities = 706/1019 (69%), Gaps = 12/1019 (1%) Strand=Plus/Plus Query 4607 CTCGATACTGAAACATTCTCAGAAGCCGATTTGAAAAAAGTCGGTTCCTATGCCTACGCC 4666 |||||||| || || | || |||||||| ||||||||| ||| ||||||| || || Sbjct 172 CTCGATACCGAGACGTATTCCGAAGCCGACTTGAAAAAATGCGGCGCCTATGCGTATGCG 231 Query 4667 GAACATCCGACTACTGAAATTGTTATCTGCACTTATGCTTTCGATGAAGGCCCTGTGCAA 4726 ||||| | |||| ||||| | ||||||| || || ||||| || | ||||| Sbjct 232 GAACACCTATCTACCGAAATCATGATCTGCAGCTACGCGTTCGACGATGAAAAGGTGCAG 291 Query 4727 GTATGGGACGCCACCGACGGCAGCGATATGCCGCGTGATTTGCGTCGGGCGATGCTGAAG 4786 |||||||||||||||||||||||| |||||||| || || || ||| ||| | Sbjct 292 GTATGGGACGCCACCGACGGCAGCCGCATGCCGCGCGACCTGAAACGTGCGCTGCGCGAA 351 Query 4787 CTGCAAAAACCAGACAGCAATCTCAAACTGGTAGGCCAAAACTTCCTTATGTTCGACCGA 4846 ||| | || || | | | | ||||||| || ||| ||| |||||||||| Sbjct 352 CTGGCGAGGCCCGATACCGAAAGCCGACTGGTAATGCAGAACGGCCTGCTGTTCGACCGG 411 Query 4847 CCAGTTATTAAGCATTGCTGGGGATTCGAACTCCTGGTAGAAAACATTATAGACACTATG 4906 | | || | |||||||| | ||| ||| | | || || |||||| ||| Sbjct 412 CTGCTGATGCGAGAATGCTGGGGCTACGATATCCCGCCGGCCAATATCGAAGACACCATG 471 Query 4907 ATAGTCGCGTTCCGACATGCCCTCCCAGGTTCACTGGCTGCGCTGTGTGAGGTTTTAAAC 4966 || | |||||||| || || || || ||| |||| ||| || || || || | Sbjct 472 ATCATGGCGTTCCGCCACGCGCTGCCGGGTAGCCTGGATGCACTATGCACCGTGCTAGGC 531 Query 4967 ATTGACGCAAGCATG--GCTAAGGATAAACGCGGTAAGGCGCTTATACAGCGATTCAGTA 5024 | || | |||| || ||||| || || |||||||| || | || ||| ||| Sbjct 532 GTCGATG--AGCAGAACGCCAAGGACAAGGCGGGCAAGGCGCTGATCAACCGCTTCTGTA 589 Query 5025 AGCCTACGCCTAAGAACTATAAGATTCGACGCTACACCGCCGATACCCACCCAAAAGAGT 5084 |||||||||||||| || ||| | || |||||||| |||| ||| ||||| | |||| Sbjct 590 AGCCTACGCCTAAGTCGTACAAGGTGCGCCGCTACACGGCCGCTACGCACCCCGACGAGT 649 Query 5085 GGGCAGAATTTATCGCATACGCAAAAAGCGACATTACGTCCATGCGTGAAGTGTATAAGA 5144 |||| |||| ||| ||||| |||||||| ||||||||| || |||||| | Sbjct 650 GGGCCAAATTCATCAAGTACGCCCGCAGCGACATCCTGTCCATGCGCGAGGTGTATTACC 709 Query 5145 AAATGCCTAAGTGGGGTAATTCTGAGTTCGAAGACCGCGTGCT--TAGCTTAGACCAGGT 5202 || || | ||||| || | ||| || || | || || ||| |||||| | Sbjct 710 GCATCCCGACCTGGGGCAACACCGAGAAGGAGAACGAAATCCTGGTA-CTT-GACCAGCT 767 Query 5203 TATTAATGACCGTGGATTTAAGGTTGATGTTGCCCTTGCTGAAGCCGCGATTGAAGCTGT 5262 || || ||||| || || || || || | | | || | || ||||| || || || Sbjct 768 GATCAACGACCGCGGCTTCTGTGTGGACGTCGACTTGGCCAAGGCAGCGATCGAGGCCGT 827 Query 5263 CACGCGTCACAAGGAAGAGTTACAGGAAGAAGCC--CAACGTAAATACGGCGGTTCACTG 5320 ||||| |||||| ||||| | |||| || ||| ||| | | |||||| | ||| Sbjct 828 GACGCGCCACAAGCAAGAGCTGCAGGCTGAGGCCACCAAGG--AGTACGGCAGCGGCCTG 885 Query 5321 ACAGGCAAATACTTCCTGCCTATTTTACAGGAACTAGCGCCGGCGCACCGCATACATAAT 5380 || || | ||||||||| | | | || || ||||||||||| || | || Sbjct 886 ACCGGGGCCTCCTTCCTGCCGACGCTGCGCGACCTGGCGCCGGCGCATGAAATCCCGAAC 945 Query 5381 GCGCAGAAGTCAACGCTAAACGACCTGCTGGCGGATGAGGATTTACCAGACGATGCGCGC 5440 |||||||| || |||||||||||||||||||| || || | || ||||| |||||| Sbjct 946 GCGCAGAAATCGACGCTAAACGACCTGCTGGCCGACCCCGACCTGCCGGACGAGGCGCGC 1005 Query 5441 ACCATCATTGAGATGCGTCTGGGGGCCGCGTCTACCGCATCGACGAAATACGCGCCGTTG 5500 | || || ||||| ||||| || ||||| ||||||||||| |||||||| ||| || Sbjct 1006 GAGCTGATCGAAATGCGCCTGGGCGCGGCGTCCACCGCATCGACAAAATACGCTCCGCTG 1065 Query 5501 CTGTTAGGCCGTTCTTCAGATGACCGCCGCCGTGGTTGCCTGCAATACGGAGGAGCGAAG 5560 ||| | |||| || || | |||||||| || |||||||| |||||||| || || Sbjct 1066 CTGCTCGGCCTGTCGCGCGACGGGCGCCGCCGCGGGTGCCTGCAGTACGGAGGGGCTAAA 1125 Query 5561 CGAACATTGCGGTGGGCCGGGAAAGGTTTTCAGCCACAGAACCTGGCGCGCGGGTATTA 5619 || || |||| |||||||| ||||| || ||||| |||||||||||||||||||| || Sbjct 1126 CGCACGCTGCGCTGGGCCGGTAAAGGCTTCCAGCCGCAGAACCTGGCGCGCGGGTACTA 1184 Score = 111 bits (122), Expect = 4e-20 Identities = 195/279 (70%), Gaps = 4/279 (1%) Strand=Plus/Plus Query 7783 ACGCCTGAAGGGCGCGTGCAAAAATACGCAAAGGAGCGA-TTTGAGGCCCTGGGTGGCCT 7841 || ||||||||| || ||| ||||| || | ||| |||||| || || | ||| Sbjct 2478 ACCCCTGAAGGGAAAGTCCAAGCCTACGCCAAAGC-CGAGTTTGAGAAGCTCGGCGCCCT 2536 Query 7842 CGTTCGGAAACTTTCCTATGAGGGGCGCTCCGG-TGCTCCTGACCTGTTGATAATTCTCC 7900 || | ||| | || ||||||||| || ||| || || ||| || | |||| | Sbjct 2537 GGTAAGAAAAATCCGATACGAGGGGCGCAATGGGTGCCCC-GATCTGCTGGTGCTTCTGC 2595 Query 7901 CTGGCGGCATCGTCTGGTTCGTCGAGGTGAAGAAAGACGAAAACACGAAGCCGGACCCGC 7960 | | ||| |||| |||||||||||||||||||||||||| ||| | ||||||| Sbjct 2596 CGAGAGGCGTCGTGTGGTTCGTCGAGGTGAAGAAAGACGAGGCCACCGGCACAGACCCGC 2655 Query 7961 ACCAGTTACGGGAGCACGAGCGGATGCGCAAACGCGGGGCAAATGTTTTTGTTGTCGGGT 8020 ||||| ||| |||||||| || |||| || ||||| || ||||| ||| ||||| Sbjct 2656 ACCAGGCACGCGAGCACGAACGCATGCAAAAGCGCGGCGCCAATGTGTTTACCGTCGGCA 2715 Query 8021 CTAAGAAACAGGTTGATAAATTAATAGAACACTATTATA 8059 || |||||||| | |||| | | ||||||||| Sbjct 2716 GCAAATCGCAGGTTGACAGCCTAATCGCAAACTATTATA 2754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133853517138520