Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_028869.1 Length=153714 Score E Sequences producing significant alignments: (Bits) Value seq988 91.5 1e-13 >seq988 Length=203328 Score = 91.5 bits (100), Expect = 1e-13 Identities = 175/254 (69%), Gaps = 13/254 (5%) Strand=Plus/Minus Query 129493 TTCGGCGGGACCGACTGCGCGCTGCCGCTGGTCTGGGCCAAGGAGTCGAAG--GCCGAGT 129550 |||||| | ||||||||||||| |||| || ||||||||| | || |||| ||| || Sbjct 199313 TTCGGCAGTACCGACTGCGCGCAGCCGATGCTCTGGGCCACGCAGAAGAAGAAGCC--GT 199256 Query 129551 TCGACACCTTCCAGATCTACACCGACAATGAGACCTGGGCGGGCAACATCCACGTCGACC 129610 ||||| | ||| ||| ||||||||| || |||||| || | | ||| | Sbjct 199255 TCGACGCGTTCATCGTCTTCACCGACAACGACACCTGGCACGGAGAAGTGCACCCGTTCG 199196 Query 129611 AGGCGCTGGAGCACTACCGTCAGTCCTCGGGTATC---GATGCTCGGGTGGAGATCGTG- 129666 ||||| | || | ||||| ||||| ||| ||| ||||| || | |||||| Sbjct 199195 AGGCGATTAAGGAGTACCGCGAGTCCATGGGCATCGAGGATGCGCGCCT---TATCGTGT 199139 Query 129667 --GCCATGACGGCCAACGGCATCAGCCTGTGCAACCCGGACGACCCGGGCATGCTGGACG 129724 | |||||| ||| || | ||| | | | |||| ||||| ||||||||||||| Sbjct 199138 GCGGCATGACCTCCACCGACTTCACCATCGCCGACCCCACGGACCCCGGCATGCTGGACG 199079 Query 129725 TCTCGGGCTTCGAC 129738 || ||||||||| Sbjct 199078 TCGTCGGCTTCGAC 199065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 491747198448480