Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq31 105 8e-18 >seq31 Length=5916 Score = 105 bits (116), Expect = 8e-18 Identities = 119/158 (75%), Gaps = 1/158 (1%) Strand=Plus/Plus Query 46594 ATAAAAG-TAAAGATTTGATTGGTATTCCTTGGATGTTGGCATTTGCATTAAGAGCAGAT 46652 || |||| |||||| |||| || ||||| |||||| |||| || || | | || || Sbjct 4987 ATGAAAGATAAAGACCTGATCGGCATTCCGTGGATGCTGGCCTTCGCCCTGCGTGCGGAC 5046 Query 46653 GGTTGGTATCTAAGACAAGATATTATATGGCATAAACCTAATCCAATGCCAGAAAGTGTA 46712 || |||||| || | || || || ||||||||||| || || |||||||| || ||||| Sbjct 5047 GGCTGGTATTTACGGCAGGACATCATATGGCATAAGCCGAACCCAATGCCGGAGAGTGTG 5106 Query 46713 AAAGATAGATGCACTAAATCACATGAATATATTTTCTT 46750 ||| | ||||| ||| | ||||| ||||||||||| Sbjct 5107 CGCGATCGCTGCACGAAAGCCCATGAGTATATTTTCTT 5144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631414871383920