Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq1082 86.0 4e-12 >seq1082 Length=994433 Score = 86.0 bits (94), Expect = 4e-12 Identities = 102/136 (75%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 24562 CCACGGATTTCATATTCACGAATTTGGCGATGTGACCAACGGTTGCACGTCGGCCGGTGA 24621 |||||| || ||| |||| ||| ||| ||| |||||||| |||| || || ||| Sbjct 79834 CCACGGCTTCCATGTTCATCAATATGGTGATTCAACCAACGGCTGCATCTCTGCAGGTCC 79775 Query 24622 GCATTTCAATCCGTTTCACCAAGATC-ACGGTGGTCCTAAGGATGCAATTCGTCACATGG 24680 || ||||| ||||| | ||||| | |||||||||| ||||| | || ||||||| | | Sbjct 79774 TCACTTCAACCCGTT-CGGCAAGACCCACGGTGGTCCCAAGGACGAAACTCGTCACGTTG 79716 Query 24681 GTGATTTGGGTAACGT 24696 | ||| |||| ||||| Sbjct 79715 GAGATCTGGGAAACGT 79700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355855625491974