Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1526 84.2 2e-11 >seq1526 Length=386723 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||| ||| |||||| || || || || || || ||| || || | | |||| ||| Sbjct 246101 ACCAGATGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCTTCCGTCCTCA 246160 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| || || || |||||||||||||||| || | | || |||||| | Sbjct 246161 AGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGG 246220 Query 39196 ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 || || |||| || | | ||| || | ||| || || | ||||| | ||| Sbjct 246221 ATCTTGGCCTTGACGTTCTCGATCGTGTCCGAAGCCTCGACTTCTAGGGTGATGGTCTTT 246280 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || ||||| || || || ||||| ||||| Sbjct 246281 CCGGTCAGAGTCTTCACGAAGATCTGCAT 246309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429537422794106