Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1448 91.5 1e-13 >seq1448 Length=718282 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 27523 TGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCC 27582 |||||||| || | ||| || |||||||||||||| | | | ||| ||| |||||| Sbjct 562496 TGGAACCCATAAATCGGCCCAAGGTCTCCCTCTTCGCGCTCCGTGAATCCCAAATTGTCC 562437 Query 27583 AAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTG 27642 | ||| | | |||||||| |||||| || || || |||||| ||| ||| | || Sbjct 562436 AGGAAGGCGCGCGAACCGTTTAAGTCCCAAATTTTAACTCCCTTCGCGGTGAGGTTCTTC 562377 Query 27643 GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACC 27702 | ||| ||| | | || |||||| || ||||| |||| | ||||| ||||| Sbjct 562376 GCGTTCGTGTCGGCCCCGATGAACCAATTGAGTTCCTCGACGATTCCTTTCCAGAAGACG 562317 Query 27703 CTCTTGGTCGTGA 27715 | ||| ||||||| Sbjct 562316 CGCTTCGTCGTGA 562304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369500165737622