Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq893 114 2e-20 seq964 91.5 2e-13 >seq893 Length=1694367 Score = 114 bits (126), Expect = 2e-20 Identities = 241/359 (67%), Gaps = 3/359 (1%) Strand=Plus/Plus Query 75478 ATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCT 75537 ||| ||||| | |||||| || || |||| |||||| || |||||| | || || | Sbjct 1629974 ATAGCTCGGCTTGGCTATGTGGATGTTCAGCGACTGCGACTGGTCGATGTAGGCGCCGCG 1630033 Query 75538 ATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTG 75597 || |||||||| | || ||| ||| || | ||||||||||| || ||| | | | Sbjct 1630034 GTCGGCCGCCATCTCCATGATGTCCTTCTGCGAAATTTCCCAAACTGTCTTGTACAAGTC 1630093 Query 75598 TTTGATATCATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGT 75654 | | ||| | |||| | | || ||| ||||||||||| | || || || Sbjct 1630094 CTGAAGATCCTTGGGAATGTCGGCGATACCTTGGATGGATCCGCCCTTCGAGATGATCTC 1630153 Query 75655 ATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATT 75714 ||||||| || || | ||||| || ||| | | || | || ||||||||||| Sbjct 1630154 GTTCTTGAGCTTGTCGTCCCACAGGTTCAGCTCAACCAGATCTTTCAGCAGATGAGGATT 1630213 Query 75715 AACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTC 75774 || || ||||| || || || | || | ||| ||||||| || ||| || || || Sbjct 1630214 GACGATCTGAAAGTCACCGGAGAGGACGCGGCGACTGTAAATGTTGGAGGTGTACGGCTC 1630273 Query 75775 CACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCA 75833 | || || ||||| || | || ||||| || || || || ||||| ||||| |||| Sbjct 1630274 AATCGACTCGTTGTTGCCGAGGATCTGAGCGGTGGACGCTGTGGGCATCGGTGCGACCA 1630332 >seq964 Length=244507 Score = 91.5 bits (100), Expect = 2e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 46622 ACATTAAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAA 46681 |||| | ||| || || || | ||||| ||||| |||| || | |||||| Sbjct 33929 ACATAAGACAGGCGAAGTCGCGGTGAAGTCCTTCGTCTCGGGAGATCAGCTCGTTACTGT 33988 Query 46682 ATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAG 46741 ||||| |||||||| ||||||||||| |||||||| || || || ||||| || || | Sbjct 33989 GGGTGAGTCCAGGCATCAGTCCACGCTTCTTGAGCCAGAAGATGGCAGCGAAGGAACCCG 34048 Query 46742 AAAAGAATATGCCTTCTACAGCCGCGAATGCGA 46774 | || || |||||||| || || ||||| |||| Sbjct 34049 AGAAAAAAATGCCTTCAACGGCGGCGAACGCGA 34081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712920479955840