Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq1419 134 3e-26 seq1526 131 4e-25 seq1117 131 4e-25 seq652 109 1e-18 seq988 89.7 1e-12 seq1101 87.8 4e-12 >seq1419 Length=601844 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | || || || |||||||||||||||||||| ||| | ||||| Sbjct 538422 GAGACGGAGGACCAAGTGGAGGGTCGACTCTTTTTGGATGTTGTAGTCGCTGAGGGTTCT 538363 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || || ||||||||||| | ||||||||| | | |||||||| Sbjct 538362 TCCGTCCTCGAGTTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCGGGAGGAATTCCTTC 538303 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || || |||| | | |||| || | ||| || || || || Sbjct 538302 CTTGTCCTGGATCTTAGCCTTCACGTTCTCGATGGTGTCAGACCCCTCGACCTCCAGGGT 538243 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || || || |||||||||||||||| |||||| Sbjct 538242 AATCGTCTTTCCTGTCAGAGTCTTCACGAAGATCTGCAT 538204 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || || || ||||| || ||||||||||| ||| | || | || ||| Sbjct 539146 AGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCT 539087 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || ||||||||||| | |||||| || | | |||||||||||| || Sbjct 539086 TCAAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCGGGAGGGATTCCTTCCTTGTCC 539027 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||| || |||| | | |||| || | ||| || || || || || || Sbjct 539026 TGGATCTTGGCTTTCACGTTCTCAATGGTGTCAGATCCCTCGACCTCCAGGGTGATCGTC 538967 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || |||||||||||||||| |||||| Sbjct 538966 TTTCCGGTCAGAGTCTTCACGAAGATCTGCAT 538935 Score = 111 bits (122), Expect = 4e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || ||||| | ||| ||||| || ||||||||||| ||| | || | || ||| Sbjct 537959 AGAACGAGATGCAAAGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCGTCT 537900 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| ||||||||||| | | |||||| || | | || || ||||| | Sbjct 537899 TCAAGCTGCTTT--CCGGCGAAGATCAAGCGCTGCTGATCGGGAGGAATGCCCTCCTTGT 537842 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || || || |||||| | || | |||| ||| ||| || ||||| ||||| | Sbjct 537841 CCTGGATCTTGGCCTTGACATTTTCGATAGTGTCGGAAGCCTCAACCTCAAGGGTAATGG 537782 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || |||||||||||||| ||||||| ||||| Sbjct 537781 TCTTCCCCGTGAGAGTCTTGACGAAGATTTGCAT 537748 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | || || || ||||| || || |||||||| ||| | ||| | Sbjct 538650 GAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGTATGTTGTAGTCGCTGAGAGTGCG 538591 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| | || ||||| ||||| | | ||||||||| | | || || || Sbjct 538590 GCCATCTTCCAACTGCTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTC 538531 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || || || |||| | | |||| || | ||| || |||||||| Sbjct 538530 CTTATCTTGGATCTTAGCCTTCACGTTCTCGATGGTGTCAGACCCCTCGACCTCAAGAGT 538471 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || |||||||||||||||| |||||| Sbjct 538470 GATCGTCTTTCCTGTCAGAGTCTTCACGAAGATCTGCAT 538432 Score = 105 bits (116), Expect = 2e-17 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || ||||| |||||||| | ||||||||| | | ||||||||||| || || || || Sbjct 538802 TTACCGGCAAAGATAAGGCGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCCTGGATCTTG 538743 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 || || |||| | | |||| || | ||| || ||||||||||| || || || || Sbjct 538742 GCCTTCACGTTCTCGATGGTGTCAGATCCCTCAACCTCAAGAGTAATCGTCTTTCCGGTC 538683 Query 152082 AGAGTCTTCACGAAGACCTGCAT 152104 |||||||||||||||| |||||| Sbjct 538682 AGAGTCTTCACGAAGATCTGCAT 538660 Score = 104 bits (114), Expect = 5e-17 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | || || || |||||||||||||||||||| || ||||| | Sbjct 538194 GAGACGGAGGACCAAGTGGAGGGTTGACTCTTTTTGGATGTTGTAGTCACTCAAAGTGCG 538135 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || || || ||||| ||||| | | ||||||||| | | || || || Sbjct 538134 GCCATCCTCGAGCTGCTTGCCGGCAAAGATCAATCGCTGCTGGTCTGGGGGAATGCCCTC 538075 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || || || |||| | | |||| || | ||| || || | || Sbjct 538074 CTTATCTTGGATCTTAGCCTTCACGTTCTCGATGGTGTCGGATCCCTCAACCTCCAAGGT 538015 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||| || || || || || ||||| ||||||| |||||| Sbjct 538014 AATCGTCTTTCCGGTCAGCGTCTTGACGAAGATTTGCATT 537975 >seq1526 Length=386723 Score = 131 bits (144), Expect = 4e-25 Identities = 161/220 (73%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| ||||| || || || || || ||||||||||| ||| | ||| || Sbjct 246091 GAGACGGAGGACCAGATGGAGCGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGAGTCCT 246150 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || || |||||||| || | ||||||||| | | ||||||||| Sbjct 246151 TCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGAGGGATTCCTTC 246210 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| |||| | |||| ||| ||| ||||| || || Sbjct 246211 CTTGTCCTGGATCTTGGCCTTGACGTTCTCGATCGTGTCCGAAGCCTCGACTTCTAGGGT 246270 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || || |||||||||||||||| ||||||| Sbjct 246271 GATGGTCTTTCCGGTCAGAGTCTTCACGAAGATCTGCATT 246310 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| ||||| ||||| || || || ||||||||||| ||| | || | Sbjct 246319 GAGACGGAGGACCAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGCTGAGGGTACG 246378 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || || ||||||||||| | ||||||||| | | ||||||||| Sbjct 246379 GCCGTCTTCGAGTTGCTTGCCAGCGAAGATAAGGCGCTGCTGGTCTGGAGGGATTCCTTC 246438 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || ||||| |||| | | |||| || ||| ||||| || || Sbjct 246439 CTTGTCCTGGATCTTGGCCTTGACGTTCTCGATGGTGTCCGACGCCTCGACTTCCAGGGT 246498 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || |||||||||||||||| ||||| Sbjct 246499 GATCGTCTTTCCGGTCAGAGTCTTCACGAAGATTTGCAT 246537 Score = 98.7 bits (108), Expect = 2e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || ||||| |||||||| | ||||||||| | | |||||||||||| || ||||| || Sbjct 247468 TTACCGGCAAAGATAAGACGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGAATCTTG 247527 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 ||||| |||| | |||| ||| ||| ||||| || || || || || || || Sbjct 247528 GCCTTGACGTTCTCGATCGTGTCCGAAGCCTCGACTTCCAGGGTGATCGTCTTTCCGGTC 247587 Query 152082 AGAGTCTTCACGAAGACCTGCATTTTA 152108 ||||| |||||||||| ||||| ||| Sbjct 247588 AGAGTTTTCACGAAGATTTGCATGTTA 247614 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 151968 GCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTG 152027 ||||||||||| | ||||||||| | | |||||||||||| || || || || || Sbjct 247199 GCGAAGATAAGGCGCTGCTGGTCGGGAGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTC 247258 Query 152028 ACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTC 152087 || |||| | |||| || ||| ||||| || || || || || || || |||||| Sbjct 247259 ACGTTCTCGATCGTGTCCGACGCCTCGACTTCCAGGGTGATCGTCTTTCCGGTCAGAGTC 247318 Query 152088 TTCACGAAGACCTGCAT 152104 |||||||||| ||||| Sbjct 247319 TTCACGAAGATTTGCAT 247335 >seq1117 Length=604131 Score = 131 bits (144), Expect = 4e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| |||||||| || ||||| || ||||||||||| ||| | ||| | || || Sbjct 393874 AGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGTTGAGAGTCCGGCCGTCC 393815 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || ||||||||||| | |||||| || | | |||||| ||||| || Sbjct 393814 TCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCAGGAGGGATTCCCTCCTTGTCC 393755 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| ||||| |||| | ||| |||| || || ||||| || || || Sbjct 393754 TGGATTTTGGCCTTGACGTTCTCAATTGAGTCAGAACCTTCGACCTCAAGTGTGATGGTC 393695 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| |||||||| ||||||| |||||| Sbjct 393694 TTGCCCGTAAGAGTCTTGACGAAGATCTGCAT 393663 >seq652 Length=32697 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| || || || || ||||| || ||||||||||| ||| | ||| | || || Sbjct 6645 AGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGTTGAGAGTCCGGCCGTCC 6586 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || ||||||||||| | |||||| || | | ||| || ||||| || Sbjct 6585 TCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCC 6526 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| |||| | ||| |||| || || ||||| || || || Sbjct 6525 TGGATCTTGGCCTTGACGTTCTCAATCGAGTCAGAACCTTCGACCTCAAGGGTGATGGTC 6466 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 |||||||| |||||||| || |||| |||||| || Sbjct 6465 TTGCCCGTAAGAGTCTTGACAAAGATCTGCATCTT 6431 Score = 107 bits (118), Expect = 4e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 |||||| || ||||| || ||||||||||| ||| | ||| | || || || || Sbjct 6865 ATGAAGCGTGGACTCCTTCTGGATGTTGTAGTCGTTGAGAGTCCGGCCGTCCTCGAGCTG 6806 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 || || ||||||||||| | |||||| || | | ||| || ||||| || || || || Sbjct 6805 CTTGCCAGCGAAGATAAGACGCTGCTGATCAGGAGGGATGCCCTCCTTGTCCTGGATCTT 6746 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||||| |||| | ||| |||| || || ||||| || || || |||||||| Sbjct 6745 GGCCTTGACGTTCTCAATCGAGTCAGAACCTTCGACCTCAAGGGTGATGGTCTTGCCCGT 6686 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 |||||||| || |||| |||||| Sbjct 6685 AAGAGTCTTGACAAAGATCTGCAT 6662 Score = 89.7 bits (98), Expect = 1e-12 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||| || ||||| | ||| ||||| || ||||||||||| ||| | || | ||||| Sbjct 7102 GAGAACGAGATGCAAAGTTGACTCCTTCTGGATGTTGTAGTCGTTGAGGGTGCGGCCATC 7043 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || || || || ||||| | |||||| || | | || || ||||| || Sbjct 7042 CTCAAGCTGCTTGCCAGCAAAAATAAGTCGCTGCTGATCTGGGGGAATGCCCTCCTTGTC 6983 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 |||||| || || || |||| | || || | || ||||| | |||||| || Sbjct 6982 TTGAATCTTGGCCTTAACGTTCTCGATCGAATCGGACCCTTCGACTTCCAAAGTAATCGT 6923 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 || || || || |||||||| |||| ||||||| Sbjct 6922 CTTTCCAGTAAGGGTCTTCACAAAGATCTGCATT 6889 >seq988 Length=203328 Score = 89.7 bits (98), Expect = 1e-12 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || ||||||||||| || | |||||||| | | |||||||||||| |||||||| || Sbjct 72309 TTACCGGCGAAGATGAGACGTTGCTGGTCAGGAGGGATTCCTTCCTTGTCTTGAATCTTG 72368 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 || ||| | || | | |||| || || || || || || || ||||| |||||| Sbjct 72369 GCCTTCACATTTTCGATGGTGTCGGAGGCTTCGACCTCGAGGGTGATCGTTTTACCCGTG 72428 Query 152082 AGAGTCTTCACGAAGACCTGCATT 152105 || || || ||||| | ||||||| Sbjct 72429 AGGGTTTTGACGAAAATCTGCATT 72452 >seq1101 Length=331277 Score = 87.8 bits (96), Expect = 4e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 151962 TTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTT 152021 || ||||| ||||| || | ||||||||| | | |||||||||||| || || || || Sbjct 90959 TTACCGGCAAAGATCAGGCGCTGCTGGTCTGGAGGGATTCCTTCCTTATCCTGGATCTTG 90900 Query 152022 TGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTG 152081 |||||| |||| | | |||| || ||| || || || || || || ||||| || Sbjct 90899 GCCTTGACATTCTCAATGGTGTCGGAGGCCTCGACCTCGAGGGTGATGGTCTTGCCGGTC 90840 Query 152082 AGAGTCTTCACGAAGACCTGCAT 152104 | |||||| ||||| | |||||| Sbjct 90839 AAAGTCTTGACGAAAATCTGCAT 90817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153797708440102