Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20carpocapsae_20[genbank_20GCA_5F000757645.1_202014-09- 24] 1,562 sequences; 85,934,671 total letters Query= NC_031925.1 Length=43788 Score E Sequences producing significant alignments: (Bits) Value seq31 634 2e-177 >seq31 Length=5916 Score = 634 bits (702), Expect = 2e-177 Identities = 969/1369 (71%), Gaps = 40/1369 (3%) Strand=Plus/Plus Query 25821 CGCGAATACCAAAAGCTAATGACTTCGTTCATGTTGCGACACCATCGCTGCAACATATGG 25880 |||||||| ||||| |||||||| | ||| |||| |||| |||||||| | ||| Sbjct 3206 CGCGAATATCAAAAACTAATGACGCGGCATATGCTGCGTCACCCACGCTGCAATGTGTGG 3265 Query 25881 GCAAGCATGGGTGCCGGGAAGACTGGCAGCGTACTGTGGGCATTAAACCGCCTGTTTCG- 25939 || | ||||| |||| ||||| || | ||||| | | ||||||||||| | Sbjct 3266 GCGACAATGGGCTCCGGCAAGACCGGGGCCACCATGTGGACGCTGAACCGCCTGTTCCAA 3325 Query 25940 ----CAACG-----------GG--CAGCTAAC--AGAA-GAAGACCGGGTATTAATCCTC 25979 ||| | || | | |||| ||| | || ||||| | ||||| Sbjct 3326 TCCTCAAAGCTGGAAGATTGGGACCCGGTAACTCAGACCGGCGATCGGGTGCTTATCCTG 3385 Query 25980 GCCCCGTTGCGTGTTGCGTCGGGTACGTGGCCCGCGGAACAAACTAAGTGGGGGTTCCCT 26039 || ||| |||| ||||| || || || ||||| || ||||| ||||||| ||||| Sbjct 3386 GCGCCGCTGCGCGTTGCATCAGGCACCTGGCCGGCCGAACAGGTGAAGTGGGATTTCCCA 3445 Query 26040 TGCCTTCGTGTCATCGATGCAACCGGTTCGGAGAAGCG--CCGCATAGCGGCGCTGGAGT 26097 ||||| || ||| | || | ||||| | ||| || |||| | ||||||||| | Sbjct 3446 TGCCTGCGCGTCGTGGACGGCACCGG--CAAAGAGGCCGACCGCCTGGCGGCGCTGAAC- 3502 Query 26098 CGGACGCT---AATGTGGTGTGCACTAACTACGAAGTTATCGAGTGGCTGATTGATTACT 26154 |||| | || ||||||||| |||||| || || ||||| ||| || | | || | Sbjct 3503 --GACGATTTCAACGTGGTGTGCGTTAACTATGAGGTGATCGACTGGTTGGTCGGCTATT 3560 Query 26155 ACGGCAAAGACGACTGGCCTTTTACTGTTATCGTGGCCGATGAGAGCACGAAACTGAAAT 26214 ||||| |||| ||||| || || || || || ||||| ||| ||||| || |||| Sbjct 3561 ACGGC---GACGCGTGGCCATTCACCGTCATTGTTGCCGACGAGTCGACGAAGCTTAAAT 3617 Query 26215 CTTTCCGCAGCCGTTCAGGCGGTAGCAAGCGGGCAAAGGCGCTTAGTAAGGTGGCGTTCG 26274 | ||||||||| || |||||||||||||| || ||| | || ||||| || ||||||| Sbjct 3618 CGTTCCGCAGCAAATCCGGCGGTAGCAAGCGCGCGAAGACACTCAGTAAAGTAGCGTTCG 3677 Query 26275 GTAAAGTTAAGCGTTTCATCAACCTGACCGGTACGCCGTCACCTAACGGCCTAAAGGACT 26334 |||| || ||||| || ||||| |||||||||||||| ||||| |||||||| || || Sbjct 3678 GTAAGGTGAAGCGCTTTATCAATCTGACCGGTACGCCATCACCGAACGGCCTCAAAGATC 3737 Query 26335 TGTGGGGTCAGAACTGGTTTATAGACGCTGGTGAGCGCCTCGGTTCTTCATACACGGCCT 26394 ||||||||||||||||||| | || || || ||||| ||||| || ||||| || | Sbjct 3738 TGTGGGGTCAGAACTGGTTCGTCGATGCCGGCGAGCGTCTCGGCAGCTCTTACACTGCTT 3797 Query 26395 TTACCGATAGATGGTTTAGCTCGGTACAGAAAGGCAAATC--TGCGATGGCGCGGGAGTA 26452 | |||||| | ||||| | |||||| |||||||| | ||| | || || || || || Sbjct 3798 TCACCGATCGCTGGTTCACCTCGGTGCAGAAAGG-AGATCATTACG-CCGCCCGCGAATA 3855 Query 26453 CCACGCCCGCCCTGGCGCCGATAACGAGATTCACCAGAAAATGAAGGATATCAGCCTGAC 26512 | |||||| || ||||| | |||||| ||||||||| |||| || |||| ||||| Sbjct 3856 CGCGCCCCGCCGCGGTGCCGACACCGAGATCCACCAGAAACTGAAAGACGTCAGTCTGAC 3915 Query 26513 CATTGATGCTGCTGAGTGGTTCGGTTGTGAGGCGCCTGTTATCGTACCGGTTGAAATTGA 26572 | | || || || |||| || || ||||| |||||| |||| ||||| | | || Sbjct 3916 CGTGGACGCGGCCGAGTTCTTTGGCTGTGACAAGCCTGTCGTCGTCCCGGTCGTCGTCGA 3975 Query 26573 CCTACCGAAGAAAGCGCGTCAGGCCTACATCGATATGGAAGAGAAGTTATTCGCGGAACT 26632 | || || ||||| |||| |||| || ||||| || || ||||||| ||||| Sbjct 3976 TATGCCACCAAAGGCGCGCAAGGCGTACAAGGAAATGGAGGAACAGCTATTCGCCGAACT 4035 Query 26633 GGAGAGCGGAGAAGTTGAAGCGGCTAACGCCGCCGCTAAAACGGCTAAGTGCTTGCAGAT 26692 ||| ||||| || || |||||||| ||||| || || || || || ||| ||||||| Sbjct 4036 GGATAGCGGCGAGGTCGAAGCGGCCAACGCGGCGGCCCGTACCGCCAAATGCCTGCAGAT 4095 Query 26693 TGCTTCCGGTGCCGTGTATGTGTCGGGGCCGGATGGTGAAGCAACGAAAGACTGGGAGAA 26752 || ||| || ||||||||| | || || || || | | || |||| ||| Sbjct 4096 CGCCAGCGGGGCGGTGTATGTGACCGGCGAAGACGGCGAGCGGTCTACCGAGTGGGCGAA 4155 Query 26753 AGTGCACGACGCGAAACTCGATGCGTTAGAGTCCATTGTCGAGGAGTTGCAGGGTGCGCC 26812 |||||||||||||| || || || | ||||| ||| |||| |||||| || || || Sbjct 4156 GGTGCACGACGCGAAGCTGGACGCCCTGGAGTCGATTATCGACGAGTTGTCCGGCGCCCC 4215 Query 26813 GCTGCTGGTGGCCTATCAGTTCAAGCACGAACTTGAGCGCATTCTTAGGCGATTCCCCCA 26872 |||| ||||||||||||||| ||||||||| || | |||||| | | || ||||| || Sbjct 4216 GCTGTTGGTGGCCTATCAGTACAAGCACGACCTGGCGCGCATCTTGAAACGGTTCCCGCA 4275 Query 26873 GGCGCAGGCGTTTGCGAAAGGTGCTAAGGGTAATAAGCAGATGGAATCTTGGAACCGCGG 26932 |||||||| ||| || || ||| ||||| ||| | || |||||| || Sbjct 4276 GGCGCAGGAGTTCAAAAAGGGCGCTGCCGGTAACCGCCAGGTTGAGCGCTGGAACAAAGG 4335 Query 26933 GGAAATCGAGATTTTGTGCGTGCACCCTGCATCGGCGGGCCATGGTTTGAATTTACAGGA 26992 | ||||| || |||||||| ||||| || || |||||||| || | || | ||||| Sbjct 4336 TCAGATCGAAATCTTGTGCGTTCACCCGGCGTCCGCGGGCCACGGCCTCAACATGCAGGA 4395 Query 26993 CGGCGGGCATCATCTGGCGTTTATTTCGCAAGGC-TGGAACCTGGAGCACTATTTGCAGG 27051 |||||||| || ||||| ||| || || | | |||||| | |||||||| |||| Sbjct 4396 TGGCGGGCACCACCTGGCATTT-TTCAGCGACACATGGAACTTTGAGCACTACGCGCAGA 4454 Query 27052 TTGTCGAGCGTATAGGTCCTGTACGCCAGAAACAGGCGGGCCACGAGCGTCCAGTGTTCC 27111 | || |||||||| ||||| || ||||||| ||||| || ||| ||| || |||||| Sbjct 4455 TCGTGGAGCGTATCGGTCCGGTGCGCCAGATGCAGGCCGGTCACCCGCGCCCGGTGTTCA 4514 Query 27112 TGTATCACATAGTCGCTAAAGACACGCTGGATGAGGTCGTTGCCGCGCG 27160 | || | || || || | ||||||||| || || | ||||| || Sbjct 4515 TTTACCTGATCCAGGCCAAGGGCACGCTGGACGAAGTGCTGGCCGCCCG 4563 Score = 390 bits (432), Expect = 3e-104 Identities = 699/1016 (69%), Gaps = 6/1016 (1%) Strand=Plus/Plus Query 21522 CTCGATACTGAAACATTCTCAGAAGCCGATTTGAAAAAAGTCGGTTCCTATGCCTACGCT 21581 |||||||| || || | || |||||||| ||||||||| ||| ||||||| || || Sbjct 172 CTCGATACCGAGACGTATTCCGAAGCCGACTTGAAAAAATGCGGCGCCTATGCGTATGCG 231 Query 21582 GAGCATCCAACTACCGAAATTGTTATTTGCACCTACGCTTTCGATGAAGGTCCTGTGCAA 21641 || || | | |||||||||| | || |||| |||||| ||||| || | ||||| Sbjct 232 GAACACCTATCTACCGAAATCATGATCTGCAGCTACGCGTTCGACGATGAAAAGGTGCAG 291 Query 21642 GTATGGGACGCCACAGACGGCAGCGATATGCCGCGTGATTTGCGTCGGGCGATGCTGAAG 21701 |||||||||||||| ||||||||| |||||||| || || || ||| ||| | Sbjct 292 GTATGGGACGCCACCGACGGCAGCCGCATGCCGCGCGACCTGAAACGTGCGCTGCGCGAA 351 Query 21702 CTGCAAAAACCAGACAGCAATCTCAAACTGGTAGGCCAAAACTTCCTTATGTTCGACCGA 21761 ||| | || || | | | | ||||||| || ||| ||| |||||||||| Sbjct 352 CTGGCGAGGCCCGATACCGAAAGCCGACTGGTAATGCAGAACGGCCTGCTGTTCGACCGG 411 Query 21762 CCAGTTATTAAGCATTGCTGGGGGTTCGAACTCCTGATAGAAAACATCATCGACACTATG 21821 | | || | |||||||| | ||| ||| | | || ||| ||||| ||| Sbjct 412 CTGCTGATGCGAGAATGCTGGGGCTACGATATCCCGCCGGCCAATATCGAAGACACCATG 471 Query 21822 ATAGTTGCATTCCGCCATGCCCTTCCTGGGTCACTAGCCGCGTTGTGCGAGGTTTTAAAC 21881 || | || |||||||| || || || || || | || | ||| || || | Sbjct 472 ATCATGGCGTTCCGCCACGCGCTGCCGGGTAGCCTGGATGCACTATGCACCGTGCTAGGC 531 Query 21882 ATTGACGC-CAGCATGGCTAAGGATAAACGTGGTAAGGCGCTTATACAGCGATTTAGTAA 21940 | || | ||| | | | ||||| || || |||||||| || | || || |||| Sbjct 532 GTCGATGAGCAGAACGCC-AAGGACAAGGCGGGCAAGGCGCTGATCAACCGCTTCTGTAA 590 Query 21941 GCCTACGCCTAAGAACTATAAGATTCGACGCTACACTGCCGCTACCCACCCAAAAGAGTG 22000 ||||||||||||| || ||| | || |||||||| |||||||| ||||| | ||||| Sbjct 591 GCCTACGCCTAAGTCGTACAAGGTGCGCCGCTACACGGCCGCTACGCACCCCGACGAGTG 650 Query 22001 GGCGGAATTTATTGCATACGCAAAAAGCGACATTACATCCATGCGTGAAGTGTATAAGAA 22060 ||| |||| || ||||| |||||||| |||||||| || |||||| | Sbjct 651 GGCCAAATTCATCAAGTACGCCCGCAGCGACATCCTGTCCATGCGCGAGGTGTATTACCG 710 Query 22061 AATGCCTAAGTGGGGGAATTCTGAGTTCGAAGACCGCGTGCTGTGGTTAGACCAAGTAAT 22120 || || | ||||| || | ||| || || | ||| | ||||| | || Sbjct 711 CATCCCGACCTGGGGCAACACCGAGAAGGAGAACGAAATCCTGGTACTTGACCAGCTGAT 770 Query 22121 TAACGACCGCGGATTTAAGGTTGACGTTGCCCTCGCTGAGGCCGCGATTGAAGCAGTGAC 22180 ||||||||||| || || ||||| | | | || |||| ||||| || || ||||| Sbjct 771 CAACGACCGCGGCTTCTGTGTGGACGTCGACTTGGCCAAGGCAGCGATCGAGGCCGTGAC 830 Query 22181 GCGCCACAAGGAAGAGCTACAGGAAGAAGCC--CAACGCAAATACGGCGGTTCACTAACC 22238 |||||||||| ||||||| |||| || ||| ||| | | |||||| | || ||| Sbjct 831 GCGCCACAAGCAAGAGCTGCAGGCTGAGGCCACCAAGG--AGTACGGCAGCGGCCTGACC 888 Query 22239 GGCAAAGACTTCTTGCCTATTTTACAGGAACTGGCGCCGGCGCACCGCATTCACAACGCA 22298 || |||| |||| | | | || |||||||||||||| || | ||||| Sbjct 889 GGGGCCTCCTTCCTGCCGACGCTGCGCGACCTGGCGCCGGCGCATGAAATCCCGAACGCG 948 Query 22299 CAGAAGTCAACACTAAACGATTTGCTGGCGGATGAGGATTTACCGGACGACGCCCGCACT 22358 ||||| || || |||||||| ||||||| || || | |||||||| || ||| Sbjct 949 CAGAAATCGACGCTAAACGACCTGCTGGCCGACCCCGACCTGCCGGACGAGGCGCGCGAG 1008 Query 22359 ATTATCGAGATGCGTCTCGGGGCTGCTTCTACCGCATCGACGAAATACGCGCCGTTGCTG 22418 | ||||| ||||| || || || || || ||||||||||| |||||||| ||| ||||| Sbjct 1009 CTGATCGAAATGCGCCTGGGCGCGGCGTCCACCGCATCGACAAAATACGCTCCGCTGCTG 1068 Query 22419 TTAGGCCGTTCTTCAGATGACCGCCGCCGTGGTTGCCTGCAATACGGAGGAGCGAAGCGA 22478 | |||| || || | |||||||| || |||||||| |||||||| || || || Sbjct 1069 CTCGGCCTGTCGCGCGACGGGCGCCGCCGCGGGTGCCTGCAGTACGGAGGGGCTAAACGC 1128 Query 22479 ACATTGCGGTGGGCGGGGAAAGGTTTTCAGCCGCAAAACCTGGCGCGCGGGTATTA 22534 || |||| ||||| || ||||| || |||||||| ||||||||||||||||| || Sbjct 1129 ACGCTGCGCTGGGCCGGTAAAGGCTTCCAGCCGCAGAACCTGGCGCGCGGGTACTA 1184 Score = 87.8 bits (96), Expect = 5e-13 Identities = 104/140 (74%), Gaps = 1/140 (1%) Strand=Plus/Plus Query 25390 TGGGAGCTCCTGACCTACTGGTAATTCTCCCTGGTGGCATCGTCTGGTTTGTCGAGGTTA 25449 |||| || || || || ||||| |||| || | ||| |||| ||||| |||||||| | Sbjct 2567 TGGGTGCCCC-GATCTGCTGGTGCTTCTGCCGAGAGGCGTCGTGTGGTTCGTCGAGGTGA 2625 Query 25450 AGAAAGACGAAAACACGAAGCCGGACCCGCATCAGCTACGAGAGCACGAGCGGATGCGCA 25509 |||||||||| ||| | |||||||| ||| ||| |||||||| || |||| | Sbjct 2626 AGAAAGACGAGGCCACCGGCACAGACCCGCACCAGGCACGCGAGCACGAACGCATGCAAA 2685 Query 25510 AACGCGGTGCGAATGTTTTT 25529 | ||||| || ||||| ||| Sbjct 2686 AGCGCGGCGCCAATGTGTTT 2705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139997403175000