Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq3649 87.8 4e-12
seq3729 84.2 5e-11
>seq3649
Length=5325
Score = 87.8 bits (96), Expect = 4e-12
Identities = 133/185 (72%), Gaps = 6/185 (3%)
Strand=Plus/Minus
Query 61089 CAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAAGGACT 61148
|| || || || || ||| |||||||||||||||||||| | || || | ||||| ||
Sbjct 2531 CAGGCTTCCACGTCCGAATTGTATGGAAAAGTTCAAGAAGTCCCGCAGAAAGAAACCACC 2472
Query 61149 CCGTTTTATCCTCGTAGCCCGTATGGTGTTGCAAAACTATACGCTTACTGGAT--TTGTA 61206
||||| ||||| ||| || || | || || || ||||||| |||||||| | ||
Sbjct 2471 CCGTTCTATCCGCGTTCTCCCTACGCGGTCGCGAAGCTATACGGCTACTGGATCGTGGT- 2413
Query 61207 AAAATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGATTTGT-TTCAATCACGAG 61265
|| ||||||||| | || ||||| | || || | || | | ||||| ||||||
Sbjct 2412 -TAACTACCGCGAGGCCTACAACATGTTCGCCTGCAA-TGGAATCCTCTTCAACCACGAG 2355
Query 61266 AGTCC 61270
|||||
Sbjct 2354 AGTCC 2350
>seq3729
Length=14609
Score = 84.2 bits (92), Expect = 5e-11
Identities = 57/64 (89%), Gaps = 0/64 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| |||||||||||||||||| ||||||| ||||||||| |||| |||||||||
Sbjct 6077 TGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGCTGTCGCGGGTTCGAG 6136
Query 165769 CCCC 165772
||||
Sbjct 6137 CCCC 6140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057744929639420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |