Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq5071 91.5 2e-13
>seq5071
Length=368534
Score = 91.5 bits (100), Expect = 2e-13
Identities = 302/467 (65%), Gaps = 2/467 (0%)
Strand=Plus/Plus
Query 16194 ACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAA 16253
|||| || || |||||||||| |||||| ||||| || | | || |||||||||
Sbjct 135093 ACATGAGGCATGCGAAGTCGCGATGTAGGCCTTCATCCCGGGAAATGAGTTCGTTGCTGT 135152
Query 16254 AAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCG 16313
|| | || ||||| || || || || ||||||||||| ||||| || || || |
Sbjct 135153 GGGTGAGGCCAGGCATGAGACCACGCTTTTTCAACCAGAATATGGCAGCGAACGATCCTG 135212
Query 16314 AAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTT 16373
| ||||| || ||||| |||| || || ||||| | ||| || ||| || | |
Sbjct 135213 AGAAGAAAATGCCCTCCACAGCAGCGAAGGCGATCACACGTGTTCCGAACGACGCGTTCT 135272
Query 16374 TATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTA 16433
| | || ||||| | |||| || ||||| | ||| || || | || |
Sbjct 135273 TGTCACCGATCCAACGAAGCGCCCAGTCAGCTTTCTTTTTGATGCATGGGAATTCTTGGA 135332
Query 16434 TGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAAC 16493
|||| || || | || | || || || |||| | | || | |||||||
Sbjct 135333 TGGCGTTGAAGAGCTTGTTCTTCTCACGAGGATCGGTCACGTAGGCCTCAATCATCTTCG 135392
Query 16494 TGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCT 16553
||||||||| ||||| || ||| | ||| || || || | ||||| | | ||||
Sbjct 135393 AGTACATTTCAGAGTGAATCCCCTCGACGGCGATTTGGAAGCTGTAGAACGAAAGGGCCT 135452
Query 16554 CCGCTAT-TTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCA 16612
||| || ||| || || ||| || || || || ||||| ||||| || ||
Sbjct 135453 CCGGCATCTTGACCTCTTGAGTGAAA-CGATCGATGAGATTTTCATTGACGATGCCATCT 135511
Query 16613 CTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTC 16659
||| || || || ||||||| ||| |||||| | | ||||||
Sbjct 135512 GATGCTGCGAAGAATGCCAATACATGCGAGATGAAAAACTGTTCGTC 135558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511377105104880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |