Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq5071 91.5 2e-13 >seq5071 Length=368534 Score = 91.5 bits (100), Expect = 2e-13 Identities = 302/467 (65%), Gaps = 2/467 (0%) Strand=Plus/Plus Query 16194 ACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAA 16253 |||| || || |||||||||| |||||| ||||| || | | || ||||||||| Sbjct 135093 ACATGAGGCATGCGAAGTCGCGATGTAGGCCTTCATCCCGGGAAATGAGTTCGTTGCTGT 135152 Query 16254 AAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCG 16313 || | || ||||| || || || || ||||||||||| ||||| || || || | Sbjct 135153 GGGTGAGGCCAGGCATGAGACCACGCTTTTTCAACCAGAATATGGCAGCGAACGATCCTG 135212 Query 16314 AAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTT 16373 | ||||| || ||||| |||| || || ||||| | ||| || ||| || | | Sbjct 135213 AGAAGAAAATGCCCTCCACAGCAGCGAAGGCGATCACACGTGTTCCGAACGACGCGTTCT 135272 Query 16374 TATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTA 16433 | | || ||||| | |||| || ||||| | ||| || || | || | Sbjct 135273 TGTCACCGATCCAACGAAGCGCCCAGTCAGCTTTCTTTTTGATGCATGGGAATTCTTGGA 135332 Query 16434 TGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAAC 16493 |||| || || | || | || || || |||| | | || | ||||||| Sbjct 135333 TGGCGTTGAAGAGCTTGTTCTTCTCACGAGGATCGGTCACGTAGGCCTCAATCATCTTCG 135392 Query 16494 TGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCT 16553 ||||||||| ||||| || ||| | ||| || || || | ||||| | | |||| Sbjct 135393 AGTACATTTCAGAGTGAATCCCCTCGACGGCGATTTGGAAGCTGTAGAACGAAAGGGCCT 135452 Query 16554 CCGCTAT-TTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCA 16612 ||| || ||| || || ||| || || || || ||||| ||||| || || Sbjct 135453 CCGGCATCTTGACCTCTTGAGTGAAA-CGATCGATGAGATTTTCATTGACGATGCCATCT 135511 Query 16613 CTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTC 16659 ||| || || || ||||||| ||| |||||| | | |||||| Sbjct 135512 GATGCTGCGAAGAATGCCAATACATGCGAGATGAAAAACTGTTCGTC 135558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511377105104880