Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq3295 107 2e-18
>seq3295
Length=153373
Score = 107 bits (118), Expect = 2e-18
Identities = 154/216 (71%), Gaps = 7/216 (3%)
Strand=Plus/Minus
Query 146123 CGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCAT 146182
|||||||||| || || |||| || |||||||| ||||||| |||| | || | |
Sbjct 18226 CGAGGAAGTCACGAGAGGCGTTCGCATCCCAGATTCTGACGCCTTTCGCCGCCAGATTCT 18167
Query 146183 TGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGA 146242
| | || ||| || | ||||||||| | ||||| |||| || | || |||||||||
Sbjct 18166 TCGCGTTGGTGTCGCCACGGATGAACCAAACGAGCTCCTCGACGATCGCCTTCCAGAAGA 18107
Query 146243 CCCTCTTGGTGGTCAGCAGGGGGAACTGGCCC-----CGCAGGGAGTACTTGGCCTGGTC 146297
| | ||| ||||||||||| |||| |||| | ||||| ||||| | |||||
Sbjct 18106 CGCGCTTTGTGGTCAGCAGCGGGA--TGGCGCCGTTGCGCAGCGAGTATCTCGCCTGCAT 18049
Query 146298 CCCGAAGACGGACAGGGTGCCCACGCCCGTCCTGTC 146333
||||||||| | |||||| |||||| | |||
Sbjct 18048 TCCGAAGACGCCGATGGTGCCGGTGCCCGTGCGGTC 18013
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590033768649360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |