Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq4364 120 2e-22
seq871 120 2e-22
seq611 114 1e-20
seq5007 105 5e-18
seq616 104 2e-17
seq311 104 2e-17
>seq4364
Length=177085
Score = 120 bits (132), Expect = 2e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
|||||||| |||||||| ||| || |||| |||| || || || |||||||||||
Sbjct 156956 TCCTTCTGGATGTTGTAATCGGAGAGAGTGCGACCGTCTTCGAGCTGCTTTCCGGCGAAG 157015
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
||||| ||||| || || ||||| | || || ||||| || || ||| || |
Sbjct 157016 ATCAAACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCTTGGATCTTGGCCTTCACGTTC 157075
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | | ||||| |||||| || |||| ||| ||||||||||| || || ||||||||
Sbjct 157076 TCAATGGTGTCCGAACCCTCGACTTCCAGGGTGATCGTCTTGCCAGTGAGGGTCTTCACG 157135
Query 45326 AAGATTTGCAT 45336
||||| |||||
Sbjct 157136 AAGATCTGCAT 157146
>seq871
Length=2590
Score = 120 bits (132), Expect = 2e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
||||| || |||||||||||||| || || |||| || || || |||||||||||
Sbjct 689 TCCTTTTGGATGTTGTAGTCGTTGAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAG 630
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
||||| ||||| || || || || | ||| || |||||| || || ||| || |
Sbjct 629 ATCAAACGCTGCTGATCAGGGGGAATACCTTCTTTGTCCTGGATCTTCGCCTTTACGTTC 570
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | |||||| ||| ||||| |||| ||| |||||||| || || || ||||||||
Sbjct 569 TCGATGCTGTCAGAACCTTCCACTTCCAGGGTGATCGTCTTCCCGGTGAGGGTCTTCACG 510
Query 45326 AAGATTTGCAT 45336
||||| |||||
Sbjct 509 AAGATCTGCAT 499
>seq611
Length=17302
Score = 114 bits (126), Expect = 1e-20
Identities = 141/193 (73%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| |||||||||||| || |||| | || ||||| || ||||| |||||
Sbjct 4655 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTTCCAGCGAA 4714
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
||||| ||||| ||||| || || | || |||||||| || || ||| ||
Sbjct 4715 AATCAATCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTCACGTT 4774
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | | ||||| || || ||||| | || ||||||||||| |||| ||||||||
Sbjct 4775 CTCGATGGTGTCCGATCCTTCGACCTCGAGTGTGATCGTCTTGCCAGTCAAGGTCTTCAC 4834
Query 45325 AAAGATTTGCATG 45337
||||| ||||||
Sbjct 4835 GAAGATCTGCATG 4847
Score = 105 bits (116), Expect = 5e-18
Identities = 139/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| |||||||||||| || ||| | || ||||| ||||||||||||||
Sbjct 5140 CTCCTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCATCTTCCAGCTGTTTTCCGGCGAA 5199
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | ||||| ||||| || || | || ||||||||| ||||| ||| ||
Sbjct 5200 GATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATTTTGGCCTTCACGTT 5259
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | | | || ||| || ||||| | ||| || || || || || || ||||||||
Sbjct 5260 CTCAATGGTATCGGAACCTTCAACCTCAAGGGTGATGGTTTTTCCTGTGAGCGTCTTCAC 5319
Query 45325 AAAGATTTGCATG 45337
||||| ||||||
Sbjct 5320 GAAGATCTGCATG 5332
Score = 104 bits (114), Expect = 2e-17
Identities = 146/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| ||||| |||||||| ||||||||||| ||| |||| | || || || ||
Sbjct 4415 GTGGAGCGTTGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGACCATCCTCGAGCTG 4474
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
||||||||||| || | ||||||||||| || || | || |||||||| || ||
Sbjct 4475 CTTTCCGGCGAAGATGAGGCGCTGTTGGTCTGGGGGAATTCCTTCCTTGTCTTGGATCTT 4534
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | ||||| || || || |||| |||||| |||||||| ||
Sbjct 4535 GGCCTTCACGTTCTCGATAGTGTCCGATCCTTCGACTTCCAGGGTAATGGTCTTGCCAGT 4594
Query 45313 CAGAGTCTTCACAAAGATTTGCATG 45337
|| |||||||| || || ||||||
Sbjct 4595 GAGCGTCTTCACGAAAATCTGCATG 4619
Score = 98.7 bits (108), Expect = 8e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||| ||||||||||| || ||| | || || || || |||||||||||
Sbjct 9672 CTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAA 9731
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | ||||| || || || || | || ||||||||| || || ||| ||
Sbjct 9732 GATGAGGCGCTGCTGATCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTCACATT 9791
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | | ||||| | |||| ||||| | ||| || |||||||| || || || |||||
Sbjct 9792 CTCGATGGTGTCCGAAGCCTCGACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTCAC 9851
Query 45325 AAAGATTTGCAT 45336
|||||||||||
Sbjct 9852 GAAGATTTGCAT 9863
Score = 82.4 bits (90), Expect = 6e-11
Identities = 128/183 (70%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||||||||||||||||||||| || ||| | || ||||| || |||||||||||
Sbjct 9267 CTCCTTCTGAATGTTGTAGTCCGAGAGAGTGCGGCCATCTTCCAGCTGCTTTCCGGCGAA 9326
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | ||||| ||||| || || | || ||||||||| || || ||| ||
Sbjct 9327 AATGAGGCGCTGCTGGTCTGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATT 9386
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | |||| ||| || ||||| | ||| || ||||| || || || ||||||||
Sbjct 9387 TTCAATAGTGTCGGAACCTTCAACCTCGAGGGTGATGGTCTTTCCAGTGAGGGTCTTCAC 9446
Query 45325 AAA 45327
||
Sbjct 9447 GAA 9449
>seq5007
Length=89527
Score = 105 bits (116), Expect = 5e-18
Identities = 139/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||| |||||||||||||||||| || ||| |||| || ||||| |||||||||||
Sbjct 22067 CTCTTTCTGAATGTTGTAGTCGGAGAGCGTGCGTCCGTCCTCGAGTTGCTTTCCGGCGAA 22126
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | ||||| ||||| ||||| | || |||||||| || || ||| ||
Sbjct 22127 GATGAGGCGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTT 22186
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | | | || ||||| ||||| | || |||||||| || || || || |||||
Sbjct 22187 CTCGATGGTATCGGAGCCCTCAACCTCGAGCGTGATCGTCTTCCCTGTGAGGGTTTTCAC 22246
Query 45325 AAAGATTTGCATG 45337
|||||| ||||||
Sbjct 22247 AAAGATCTGCATG 22259
Score = 96.9 bits (106), Expect = 3e-15
Identities = 137/193 (71%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||| ||||| |||||||||||| || ||| |||| || ||||| |||||||||||
Sbjct 22295 CTCTTTCTGGATGTTGTAGTCGGAGAGCGTGCGTCCGTCCTCGAGTTGCTTTCCGGCGAA 22354
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | ||||| ||||| ||||| | || |||||||| || || ||| ||
Sbjct 22355 GATGAGGCGCTGCTGGTCTGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTT 22414
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | | | || || || ||||| | || |||||||| || || || || |||||
Sbjct 22415 CTCGATGGTATCGGAGCCTTCGACCTCGAGCGTGATCGTCTTCCCTGTGAGGGTTTTCAC 22474
Query 45325 AAAGATTTGCATG 45337
|||||| ||||||
Sbjct 22475 AAAGATCTGCATG 22487
>seq616
Length=1528
Score = 104 bits (114), Expect = 2e-17
Identities = 138/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
|||||||| || ||||||||| || |||| | || ||||| || |||||||||||
Sbjct 909 TCCTTCTGGATATTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTTCCGGCGAAG 968
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
||||| ||||| ||||| || || | || || || ||| || || ||| || |
Sbjct 969 ATCAATCGCTGCTGGTCTGGGGGAATTCCTTCTTTATCCTGGATCTTGGCCTTCACGTTC 1028
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | |||| || ||||| |||| || || |||||||| |||| |||||||||
Sbjct 1029 TCAATCGTGTCGGAGCCTTCCACTTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACA 1088
Query 45326 AAGATTTGCATG 45337
||||| ||||||
Sbjct 1089 AAGATCTGCATG 1100
Score = 100 bits (110), Expect = 2e-16
Identities = 138/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
|||||||||||||||||||||| || ||| | || || || || |||||||||||
Sbjct 1136 CTCCTTCTGAATGTTGTAGTCGGACAAAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAA 1195
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
||||| ||||| ||||| ||||| | || |||||||| || || || ||
Sbjct 1196 GATCAATCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGGATCTTGGCTTTGACATT 1255
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | | |||| || || || || | ||||||||||| || || || ||||| ||
Sbjct 1256 CTCGATGGTGTCAGAGCCTTCAACTTCAAGAGTAATCGTCTTTCCGGTGAGCGTCTTGAC 1315
Query 45325 AAAGATTTGCATG 45337
||||| ||||||
Sbjct 1316 GAAGATCTGCATG 1328
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205
|| ||||| ||||||||||| || ||| | || || || || |||||||||||
Sbjct 403 TCTTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAA 462
Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265
|| | ||||| ||||| || || | || |||||||| || || ||| || |
Sbjct 463 ATGAGGCGCTGCTGGTCTGGGGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTC 522
Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325
| | | ||||| || ||||| |||| ||| ||||||||||| || || || || ||
Sbjct 523 TCGATGGTGTCCGAGCCTTCCACTTCCAAGGTGATCGTCTTGCCGGTGAGCGTTTTGACG 582
Query 45326 AAGATTTGCAT 45336
||||| |||||
Sbjct 583 AAGATCTGCAT 593
>seq311
Length=48857
Score = 104 bits (114), Expect = 2e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 45155 ATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGC 45214
|||||||||||||| || || |||| || || || ||||||||||| ||||| |||
Sbjct 16787 ATGTTGTAGTCGTTGAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAGCGC 16728
Query 45215 TGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTG 45274
|| || || ||||| | |||||||| ||| || || ||| || | | | ||||
Sbjct 16727 TGCTGATCTGGAGGAATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATGCTG 16668
Query 45275 TCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGC 45334
|| | | || || || | |||||| ||||| || || || |||||||| ||||| |||
Sbjct 16667 TCAGAAGCTTCGACTTCGAGGGTAATGGTCTTCCCGGTGAGGGTCTTCACGAAGATCTGC 16608
Query 45335 AT 45336
||
Sbjct 16607 AT 16606
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395047109412514
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