Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq5716 89.7 1e-12
seq5071 84.2 4e-11
>seq5716
Length=132174
Score = 89.7 bits (98), Expect = 1e-12
Identities = 130/182 (71%), Gaps = 4/182 (2%)
Strand=Plus/Minus
Query 94161 ATACTTCACAAACTTGTTGACTGCGATAGAAGCCAAATTGCACACTGCAGTTTCCTCCGA 94220
|| ||||||||| |||| | |||| || |||| |||||| || || ||| || |
Sbjct 122132 ATCCTTCACAAATCTGTTCAAAGCGACGGAGGCCAGATTGCAAACAGCGACTTCATCTGG 122073
Query 94221 ATCACTGTACTGGACAATTTCAGTGCACAAATTTGAAGACTTGATGATGCCGACATTTTC 94280
|||||| || ||||| ||||||| |||||| ||||||| | || | ||| |
Sbjct 122072 GGACGAGTACTGCACTATTTCGGTGCACAGATTTGAGCACTTGATCGTTCCCAAATTCTT 122013
Query 94281 TTGGTTAGACTTTCTATTGATGGTATCCT--TAAAGCACACATAAGGTGTTCCAGTTTCG 94338
||||||||||||| |||| | ||| | ||||| || ||||| ||||| ||||||
Sbjct 122012 CTGGTTAGACTTTCGATTGCATGCATCTTTGTAAAG--CATGTAAGGAGTTCCGGTTTCG 121955
Query 94339 AT 94340
||
Sbjct 121954 AT 121953
>seq5071
Length=368534
Score = 84.2 bits (92), Expect = 4e-11
Identities = 105/144 (73%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 101921 GCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATC 101980
||||| ||||| || || || || ||||| || | ||||| |||| |||||| |
Sbjct 135243 GCCTTCGCTGCTGTGGAGGGCATTTTCTTCTCAGGATCGTTCGCTGCCATATTCTGGTTG 135184
Query 101981 AAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAA 102040
|| || | ||| | ||||||| |||||| | ||| || ||||||| |||| |||
Sbjct 135183 AAAAAGCGTGGTCTCATGCCTGGCCTCACCCACAGCAACGAACTCATTTCCCGGGATGAA 135124
Query 102041 GGTCTTCATCGCGACTTTGCATGC 102064
|| || ||||||||||| ||||||
Sbjct 135123 GGCCTACATCGCGACTTCGCATGC 135100
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989510030451470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |