Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_003356.1 Length=42575 Score E Sequences producing significant alignments: (Bits) Value seq1811 136 1e-27 >seq1811 Length=36858 Score = 136 bits (150), Expect = 1e-27 Identities = 277/407 (68%), Gaps = 6/407 (1%) Strand=Plus/Plus Query 30400 ACGGCGTGGCGACGGCTTATGTGGAAGGCGGCACGTTGCGGATCCAGCGTTCCGTAACCA 30459 ||||| | || || || || || ||||| ||| || || ||||| |||| || | Sbjct 23186 ACGGCATTGCTACCGCGTACTACGAGGGCGGTTCGTACCGCATTCAGCGCGCCGTGACGA 23245 Query 30460 CATACAAAAAGAATGCATATGGCGTGGCAGACAACAGCTATCTGGACAGTGAAACACTGC 30519 | ||| | || ||||| ||| ||| || | |||||||||||| || | |||| Sbjct 23246 CGTACCAGCGCAACGCATACGGCCAGGCCGATACGTCCTATCTGGACAGCGAGCCGCTGC 23305 Query 30520 ATACCAGC--GCATATGTTCTTCGCAAACTGAAAT-CGGTCATCACAAGCAAGTACGGAC 30576 | |||| || | || ||||||| ||| || | || || || ||||| ||||| | Sbjct 23306 A--CCAGTCGGCGCACGTGATTCGCAACCTGCAAGGCCGT-ATTACCAGCAAATACGGCC 23362 Query 30577 GCCACAAGCTGGCAAATGATGGTACCCGTTTTGGTCCTGGGCAGGCGATTGTTACTCCTG 30636 | ||||||||||| || ||||| ||| || || ||| ||||| || || || || Sbjct 23363 GTCACAAGCTGGCCAACGATGGCACCGCCTTCGGCGATGGTCAGGCCATCGTGACGCCGT 23422 Query 30637 CCGTTATCAAAGGGGAGCTTCTGGCGACATATCGTCAGATGGAGCGTGCCGGTATTGTGG 30696 || ||| || ||||| ||||| | || | || ||||||| ||||| | || | Sbjct 23423 TGGTGATCCGTGGCGAGCTGGTGGCGGCCTACGGCGAGCTGGAGCGCGCCGGCCTGGTCG 23482 Query 30697 AAAATTACGATCTGTTTAAACAGTATCTGATAGTTGAGCGTGATGCGGATAACCCGAACC 30756 | || || ||||| || || | ||||| |||||||| || ||| | ||||||||| Sbjct 23483 AGAACATGGAGCTGTTCAAGCAACACCTGATCGTTGAGCGCGACGCGAAAGACCCGAACC 23542 Query 30757 GACTGAACACGCTGTTCCCGCCGGATTATGTTAACCAGTTACGTGTC 30803 || | |||||||||||||||| || |||||| | || ||| Sbjct 23543 GAATCGCGGTGCTGTTCCCGCCGGATCTGGTCAACCAGCTGCGCGTC 23589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136108969887396