Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_003356.1
Length=42575
Score E
Sequences producing significant alignments: (Bits) Value
seq1811 136 1e-27
>seq1811
Length=36858
Score = 136 bits (150), Expect = 1e-27
Identities = 277/407 (68%), Gaps = 6/407 (1%)
Strand=Plus/Plus
Query 30400 ACGGCGTGGCGACGGCTTATGTGGAAGGCGGCACGTTGCGGATCCAGCGTTCCGTAACCA 30459
||||| | || || || || || ||||| ||| || || ||||| |||| || |
Sbjct 23186 ACGGCATTGCTACCGCGTACTACGAGGGCGGTTCGTACCGCATTCAGCGCGCCGTGACGA 23245
Query 30460 CATACAAAAAGAATGCATATGGCGTGGCAGACAACAGCTATCTGGACAGTGAAACACTGC 30519
| ||| | || ||||| ||| ||| || | |||||||||||| || | ||||
Sbjct 23246 CGTACCAGCGCAACGCATACGGCCAGGCCGATACGTCCTATCTGGACAGCGAGCCGCTGC 23305
Query 30520 ATACCAGC--GCATATGTTCTTCGCAAACTGAAAT-CGGTCATCACAAGCAAGTACGGAC 30576
| |||| || | || ||||||| ||| || | || || || ||||| ||||| |
Sbjct 23306 A--CCAGTCGGCGCACGTGATTCGCAACCTGCAAGGCCGT-ATTACCAGCAAATACGGCC 23362
Query 30577 GCCACAAGCTGGCAAATGATGGTACCCGTTTTGGTCCTGGGCAGGCGATTGTTACTCCTG 30636
| ||||||||||| || ||||| ||| || || ||| ||||| || || || ||
Sbjct 23363 GTCACAAGCTGGCCAACGATGGCACCGCCTTCGGCGATGGTCAGGCCATCGTGACGCCGT 23422
Query 30637 CCGTTATCAAAGGGGAGCTTCTGGCGACATATCGTCAGATGGAGCGTGCCGGTATTGTGG 30696
|| ||| || ||||| ||||| | || | || ||||||| ||||| | || |
Sbjct 23423 TGGTGATCCGTGGCGAGCTGGTGGCGGCCTACGGCGAGCTGGAGCGCGCCGGCCTGGTCG 23482
Query 30697 AAAATTACGATCTGTTTAAACAGTATCTGATAGTTGAGCGTGATGCGGATAACCCGAACC 30756
| || || ||||| || || | ||||| |||||||| || ||| | |||||||||
Sbjct 23483 AGAACATGGAGCTGTTCAAGCAACACCTGATCGTTGAGCGCGACGCGAAAGACCCGAACC 23542
Query 30757 GACTGAACACGCTGTTCCCGCCGGATTATGTTAACCAGTTACGTGTC 30803
|| | |||||||||||||||| || |||||| | || |||
Sbjct 23543 GAATCGCGGTGCTGTTCCCGCCGGATCTGGTCAACCAGCTGCGCGTC 23589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 136108969887396
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |