Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq5716 129 8e-25
seq5071 102 1e-16
>seq5716
Length=132174
Score = 129 bits (142), Expect = 8e-25
Identities = 178/246 (72%), Gaps = 6/246 (2%)
Strand=Plus/Minus
Query 66455 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 66514
|||||| ||||| || | ||||| | ||||| |||||||| || || | ||| ||
Sbjct 121133 AGTTCCGGCATTGAAAAGCGTAGGCGTTGCGTGTGTAAACCAGCGATCGGACATTAGGTT 121074
Query 66515 GTACGTCTCAATAGCTGAGTCTAT---ATCCCATTGATGAATTCCTACTGCGACACGCAT 66571
||| || |||||||| | || || ||| ||| || || || || ||||| |||||
Sbjct 121073 GTAAGTTTCAATAGCGGCTTCAATTGAATCT--TTG-TGGATACCCACAGCGACTCGCAT 121017
Query 66572 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 66631
| || |||||| || | ||||| | || | ||| |||||||||||||| || ||
Sbjct 121016 CAGCAAGTGCTGTGGACGCTCAACAACTTTTTGGTTGATTTTCAACAAGTAAGAGCGCTC 120957
Query 66632 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 66691
||| ||||| ||||| ||||| |||||||||| || || ||||| | |||| | || ||
Sbjct 120956 CAACGTTTTGAAACCGAAATACGTGTATGAAAAATCGCGATCGTAGACAATAGCTGAATT 120897
Query 66692 GAGTTT 66697
| |||
Sbjct 120896 CAATTT 120891
>seq5071
Length=368534
Score = 102 bits (112), Expect = 1e-16
Identities = 291/445 (65%), Gaps = 3/445 (1%)
Strand=Plus/Plus
Query 36150 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 36209
|||| | |||||||| |||| ||||| || || || | ||| | |||||||
Sbjct 135093 ACATGAGGCATGCGAAGTCGCGATGTAGGCCTTCATCCCGGGAAATGAGTTCGTTGCTGT 135152
Query 36210 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAG 36269
||||| || ||||| || ||||||||||| | ||| ||||||| || || ||||| |
Sbjct 135153 GGGTGAGGCCAGGCATGAGACCACGCTTTTTCAACCAGAATATGGCAGCGAACGATCCTG 135212
Query 36270 AAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC--ATAAC-CGGCAC 36326
| |||||||| || || || || || ||||| || | | ||| | || ||
Sbjct 135213 AGAAGAAAATGCCCTCCACAGCAGCGAAGGCGATCACACGTGTTCCGAACGACGCGTTCT 135272
Query 36327 TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTA 36386
||||| ||||| | ||||| || || |||||||| | || || | | | |
Sbjct 135273 TGTCACCGATCCAACGAAGCGCCCAGTCAGCTTTCTTTTTGATGCATGGGAATTCTTGGA 135332
Query 36387 TAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGAC 36446
| || || ||||| | ||| || ||| | ||| | || || | |||||||
Sbjct 135333 TGGCGTTGAAGAGCTTGTTCTTCTCACGAGGATCGGTCACGTAGGCCTCAATCATCTTCG 135392
Query 36447 TATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCT 36506
|||||||| || ||||| || | ||| ||||| || | |||||| | ||||
Sbjct 135393 AGTACATTTCAGAGTGAATCCCCTCGACGGCGATTTGGAAGCTGTAGAACGAAAGGGCCT 135452
Query 36507 CGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCAC 36566
| | |||| || ||| | || || || | ||||||||| || || || ||
Sbjct 135453 CCGGCATCTTGACCTCTTGAGTGAAACGATCGATGAGATTTTCATTGACGATGCCATCTG 135512
Query 36567 TGGCTGCAAAAAACGCCAATACATG 36591
||||| || || |||||||||||
Sbjct 135513 ATGCTGCGAAGAATGCCAATACATG 135537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658124802748560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |