Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq5716 138 2e-27 >seq5716 Length=132174 Score = 138 bits (152), Expect = 2e-27 Identities = 180/246 (73%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 |||||| ||||| || | ||||| | ||||| |||||||| || |||| ||| || Sbjct 121133 AGTTCCGGCATTGAAAAGCGTAGGCGTTGCGTGTGTAAACCAGCGATCGGACATTAGGTT 121074 Query 80394 GTACGTCTCAATAGCTGATTCTAT---ATCCCATTGATGAATTCCTACCGCGACACGCAT 80450 ||| || |||||||| | ||| || ||| ||| || || || || ||||| ||||| Sbjct 121073 GTAAGTTTCAATAGCGGCTTCAATTGAATCT--TTG-TGGATACCCACAGCGACTCGCAT 121017 Query 80451 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTC 80510 | || |||||| || | ||||| | || | || ||||||||||||||||| || Sbjct 121016 CAGCAAGTGCTGTGGACGCTCAACAACTTTTTGGTTGATTTTCAACAAGTAAGAGCGCTC 120957 Query 80511 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 80570 ||| ||||| ||||| ||||| |||||||||| || || ||||| | |||| | || || Sbjct 120956 CAACGTTTTGAAACCGAAATACGTGTATGAAAAATCGCGATCGTAGACAATAGCTGAATT 120897 Query 80571 GAGTTT 80576 | ||| Sbjct 120896 CAATTT 120891 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 79860 TTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGA 79919 ||||||||| ||||| || ||| | || || || | || ||| ||||| | || Sbjct 121817 TTCGAACTCCTCTCCATAACAATCAGGGAGACCTGGGCACTTGTGAGGGCACATAAGAGA 121758 Query 79920 CCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAA 79979 ||||||| || ||||||||||||| |||||| | |||||||||||| | ||| ||| Sbjct 121757 CCACTCTTTGTCTTCCTTTACTCGTTCCATAAACAAATCAGGAATCCACAAAGCGTAAAA 121698 Query 79980 TAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCAT 80039 ||||||| | | | || || || |||||||| || || || ||| | | Sbjct 121697 AAGATCTCGAGCACGTTCTTCTTCTGAGCCGGTATTCTTCTTCAGTCTCAGAAACTCGAA 121638 Query 80040 AATATCAGAATGCCACGGTTCCAAGTATATGGC 80072 ||||| | |||||| ||||| | ||| || || Sbjct 121637 GATATCTGCATGCCAAGGTTCGACGTAAATCGC 121605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718216420247760