Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq4364 89.7 5e-13 seq871 82.4 8e-11 >seq4364 Length=177085 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || ||||| || || |||||||||||| | |||| ||||||||| || || || Sbjct 156950 GTCGATTCCTTCTGGATGTTGTAATCGGAGAGAGTGCGACCGTCTTCGAGCTGCTTTCCG 157009 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || |||||| ||| |||||||| ||||| |||||||||||||| || || || Sbjct 157010 GCGAAGATCAAACGCTGCTGATCTGGAGGAATGCCTTCTTTGTCTTGGATCTTGGCCTTC 157069 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | ||||||| || ||||| | || | ||||||||| || | || Sbjct 157070 ACGTTCTCAATGGTGTCCGAACCCTCGACTTCCAGGGTGATCGTCTTGCCAGTGAGGGTC 157129 Query 143168 TTTACGAATATTTGCAT 143184 || ||||| || ||||| Sbjct 157130 TTCACGAAGATCTGCAT 157146 >seq871 Length=2590 Score = 82.4 bits (90), Expect = 8e-11 Identities = 138/200 (69%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047 || ||||| ||||| |||||||| ||| | | || | ||||||||| || || || Sbjct 695 GTCGATTCCTTTTGGATGTTGTAGTCGTTGAGGGTTCGGCCGTCTTCGAGCTGCTTTCCG 636 Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107 || |||||| ||| |||||||| || || || ||||||||||| || || ||| Sbjct 635 GCGAAGATCAAACGCTGCTGATCAGGGGGAATACCTTCTTTGTCCTGGATCTTCGCCTTT 576 Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167 | | || | |||| | ||| ||||| | || | |||||| ||||| | || Sbjct 575 ACGTTCTCGATGCTGTCAGAACCTTCCACTTCCAGGGTGATCGTCTTCCCGGTGAGGGTC 516 Query 143168 TTTACGAATATTTGCATAGC 143187 || ||||| || ||||| || Sbjct 515 TTCACGAAGATCTGCATTGC 496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506977425974880