Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_005857.1
Length=51601
Score E
Sequences producing significant alignments: (Bits) Value
seq1811 147 7e-31
>seq1811
Length=36858
Score = 147 bits (162), Expect = 7e-31
Identities = 192/263 (73%), Gaps = 2/263 (1%)
Strand=Plus/Plus
Query 3332 CAGTTCGTGATGTATACGCTTT-TGGCCTGGTTGAAGCGGCATGAAGGCGCGCTGCAGCG 3390
||||| ||| ||| | |||| || ||||| ||||||| || ||| || || |||
Sbjct 16837 CAGTTTGTGGTGT-TCGGCTTGCTGCCCTGGGTGAAGCGTCACGAACAGGCAATGATGCG 16895
Query 3391 TGATTTATTGTTGCCCAGCGAACGCCGTGACTTGTATATCGAATTCAACGTTTCCGGCTT 3450
||||| || ||| || || || || || | | ||||| |||||| | |||||| |
Sbjct 16896 CGATTTTCTGCTGCTCAAGGATCGGCGGGAGTACTTCATCGAGTTCAACCTCTCCGGCCT 16955
Query 3451 ACTGCGTGGCGACCAGAAATCGCGTTATGAGTCATATGCGCTTGGCCGCCAGTGGGGCTG 3510
||||| ||||||||||| || || ||| ||||||| ||||||| || ||||||||
Sbjct 16956 GCTGCGCGGCGACCAGAAGAGCCGCTACGAGGCATATGCCATTGGCCGGCAATGGGGCTG 17015
Query 3511 GTTGTCGGTTAACGATATCCGCCGCATGGAGAATCTGCCGCCGATAGCCGGTGGAGATAA 3570
|||| || || || ||||||||| |||| || ||||||| || | ||||| ||||
Sbjct 17016 GTTGAGTGTAAATGACATCCGCCGCCTGGAAAACATGCCGCCTGTACCTGGTGGCGATAT 17075
Query 3571 ATATCTGACGCCGCTGAACATGG 3593
|||||| ||| |||||||||
Sbjct 17076 CTATCTGCAACCGTTGAACATGG 17098
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 164990168895404
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |