Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_005857.1 Length=51601 Score E Sequences producing significant alignments: (Bits) Value seq1811 147 7e-31 >seq1811 Length=36858 Score = 147 bits (162), Expect = 7e-31 Identities = 192/263 (73%), Gaps = 2/263 (1%) Strand=Plus/Plus Query 3332 CAGTTCGTGATGTATACGCTTT-TGGCCTGGTTGAAGCGGCATGAAGGCGCGCTGCAGCG 3390 ||||| ||| ||| | |||| || ||||| ||||||| || ||| || || ||| Sbjct 16837 CAGTTTGTGGTGT-TCGGCTTGCTGCCCTGGGTGAAGCGTCACGAACAGGCAATGATGCG 16895 Query 3391 TGATTTATTGTTGCCCAGCGAACGCCGTGACTTGTATATCGAATTCAACGTTTCCGGCTT 3450 ||||| || ||| || || || || || | | ||||| |||||| | |||||| | Sbjct 16896 CGATTTTCTGCTGCTCAAGGATCGGCGGGAGTACTTCATCGAGTTCAACCTCTCCGGCCT 16955 Query 3451 ACTGCGTGGCGACCAGAAATCGCGTTATGAGTCATATGCGCTTGGCCGCCAGTGGGGCTG 3510 ||||| ||||||||||| || || ||| ||||||| ||||||| || |||||||| Sbjct 16956 GCTGCGCGGCGACCAGAAGAGCCGCTACGAGGCATATGCCATTGGCCGGCAATGGGGCTG 17015 Query 3511 GTTGTCGGTTAACGATATCCGCCGCATGGAGAATCTGCCGCCGATAGCCGGTGGAGATAA 3570 |||| || || || ||||||||| |||| || ||||||| || | ||||| |||| Sbjct 17016 GTTGAGTGTAAATGACATCCGCCGCCTGGAAAACATGCCGCCTGTACCTGGTGGCGATAT 17075 Query 3571 ATATCTGACGCCGCTGAACATGG 3593 |||||| ||| ||||||||| Sbjct 17076 CTATCTGCAACCGTTGAACATGG 17098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164990168895404