Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq4165 107 2e-18
>seq4165
Length=331896
Score = 107 bits (118), Expect = 2e-18
Identities = 305/463 (66%), Gaps = 32/463 (7%)
Strand=Plus/Minus
Query 164536 GGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATTGCTCAAGCTTTTAAATCG 164595
|||||||| || ||||||||| | || |||||| |||| || || || |
Sbjct 43498 GGACCTCCGGGAACCGGTAAAACGCTGATTGCTCGACAAATTGGAAAAATGTTGAACGCC 43439
Query 164596 CG--ACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAG 164653
|| | ||| || || | || ||||| ||| | ||||||||||| || || || || |
Sbjct 43438 CGTGAACCG--AAGATAATCAACGGTCCAGAAATTTTGAACAAATACGTGGGCGAATCGG 43381
Query 164654 AAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGAACAAAAGAAAGCAGGTTTAG 164713
||| || ||| | ||| | ||| || || ||||||||| | |||| | | | |
Sbjct 43380 AAGGAAACGTTCGCAAGCTCTTTGCTGACGCCGAAGAAGAAT----GGAAGC-GTTGTGG 43326
Query 164714 CTAGTAAAT------TACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAAC 164767
|| ||| | | ||| | || ||||||| || || ||||| ||||||| | |
Sbjct 43325 CTC-TAATTCGGCGCTTCATATGATAATTTTTGACGAAATCGATGCCATTTGCAAGCAGC 43267
Query 164768 GTGGTGAT-AAT---------AT----TATTCATGATGCAGTGGTTAATCAGTTGCTTTC 164813
|||| || ||| || | |||| ||| | || || || ||| | |||||
Sbjct 43266 GTGG--ATCAATGGCTGGGTCATCCGGTGTTCACGATACCGTAGTCAACCAGCTTCTTTC 43209
Query 164814 TAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACC 164873
||||| |||||||||||| |||| || ||| | || | || ||||| ||| |||
Sbjct 43208 AAAAATGGATGGTGTAGAACAACTAAACAACATTCTTGTTATTGGAATGACTAACAGACG 43149
Query 164874 TGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGG 164933
||| | |||||||| ||| |||| || |||||||| | ||| | | || || ||
Sbjct 43148 CGATATGATTGATGAAGCTCTATTGCGTCCTGGTCGTATGGAAGTACAGATGGAGATCTC 43089
Query 164934 ATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCAT 164976
|||||| || ||| || || | || ||| | ||| | |||
Sbjct 43088 ATTACCTGATGAAGCCGGCCGTGTACAGATTCTCAAAATCCAT 43046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595828546034400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |