Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq4165 107 2e-18 >seq4165 Length=331896 Score = 107 bits (118), Expect = 2e-18 Identities = 305/463 (66%), Gaps = 32/463 (7%) Strand=Plus/Minus Query 164536 GGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATTGCTCAAGCTTTTAAATCG 164595 |||||||| || ||||||||| | || |||||| |||| || || || | Sbjct 43498 GGACCTCCGGGAACCGGTAAAACGCTGATTGCTCGACAAATTGGAAAAATGTTGAACGCC 43439 Query 164596 CG--ACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAG 164653 || | ||| || || | || ||||| ||| | ||||||||||| || || || || | Sbjct 43438 CGTGAACCG--AAGATAATCAACGGTCCAGAAATTTTGAACAAATACGTGGGCGAATCGG 43381 Query 164654 AAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGAACAAAAGAAAGCAGGTTTAG 164713 ||| || ||| | ||| | ||| || || ||||||||| | |||| | | | | Sbjct 43380 AAGGAAACGTTCGCAAGCTCTTTGCTGACGCCGAAGAAGAAT----GGAAGC-GTTGTGG 43326 Query 164714 CTAGTAAAT------TACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAAAC 164767 || ||| | | ||| | || ||||||| || || ||||| ||||||| | | Sbjct 43325 CTC-TAATTCGGCGCTTCATATGATAATTTTTGACGAAATCGATGCCATTTGCAAGCAGC 43267 Query 164768 GTGGTGAT-AAT---------AT----TATTCATGATGCAGTGGTTAATCAGTTGCTTTC 164813 |||| || ||| || | |||| ||| | || || || ||| | ||||| Sbjct 43266 GTGG--ATCAATGGCTGGGTCATCCGGTGTTCACGATACCGTAGTCAACCAGCTTCTTTC 43209 Query 164814 TAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACC 164873 ||||| |||||||||||| |||| || ||| | || | || ||||| ||| ||| Sbjct 43208 AAAAATGGATGGTGTAGAACAACTAAACAACATTCTTGTTATTGGAATGACTAACAGACG 43149 Query 164874 TGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGG 164933 ||| | |||||||| ||| |||| || |||||||| | ||| | | || || || Sbjct 43148 CGATATGATTGATGAAGCTCTATTGCGTCCTGGTCGTATGGAAGTACAGATGGAGATCTC 43089 Query 164934 ATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCAT 164976 |||||| || ||| || || | || ||| | ||| | ||| Sbjct 43088 ATTACCTGATGAAGCCGGCCGTGTACAGATTCTCAAAATCCAT 43046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595828546034400