Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_006552.1
Length=65195
Score E
Sequences producing significant alignments: (Bits) Value
seq5558 188 3e-43
>seq5558
Length=394
Score = 188 bits (208), Expect = 3e-43
Identities = 170/212 (80%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 9820 CCAGCCGCTGAACGGGTAGGCCCCGGACTCGCCCTGGAAGAAGCCCCAGGCCTTG---TT 9876
||||||||||||||||| || ||||||||| | |||||||| |||||||||||| |
Sbjct 354 CCAGCCGCTGAACGGGTGCGCGCCGGACTCGGCATGGAAGAAACCCCAGGCCTTGCCTTG 295
Query 9877 CTTGGCGTTGTAGCTTTCGTTGAGGTCGGCCAGCAGGTTCTCGATGACCTGGGAGTTACC 9936
||||||||| ||||| |||||||||||||| |||| |||||||||| | || | |
Sbjct 294 CTTGGCGTTATAGCTCTCGTTGAGGTCGGCAAGCATGTTCTCGATGGCGGCCGATTCGGC 235
Query 9937 CAGCTCAGCGTCGCGCGCATGGAGCACGGTCGGGGTGCCGTCGGGCTTCTTGTCGATCAG 9996
||||| | |||||| || || || || | || ||||||||||| || ||||||||||
Sbjct 234 AAGCTCGGAGTCGCGGGCGTGAAGAACTGCAGGTGTGCCGTCGGGTTTTTTGTCGATCAA 175
Query 9997 GTGGATGATGGAATGGCGGATAGGCAT-GGCT 10027
||||| |||| |||| ||||| ||||| ||||
Sbjct 174 GTGGACGATGCAATGACGGATCGGCATAGGCT 143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 208484375315944
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |