Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_006552.1 Length=65195 Score E Sequences producing significant alignments: (Bits) Value seq5558 188 3e-43 >seq5558 Length=394 Score = 188 bits (208), Expect = 3e-43 Identities = 170/212 (80%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 9820 CCAGCCGCTGAACGGGTAGGCCCCGGACTCGCCCTGGAAGAAGCCCCAGGCCTTG---TT 9876 ||||||||||||||||| || ||||||||| | |||||||| |||||||||||| | Sbjct 354 CCAGCCGCTGAACGGGTGCGCGCCGGACTCGGCATGGAAGAAACCCCAGGCCTTGCCTTG 295 Query 9877 CTTGGCGTTGTAGCTTTCGTTGAGGTCGGCCAGCAGGTTCTCGATGACCTGGGAGTTACC 9936 ||||||||| ||||| |||||||||||||| |||| |||||||||| | || | | Sbjct 294 CTTGGCGTTATAGCTCTCGTTGAGGTCGGCAAGCATGTTCTCGATGGCGGCCGATTCGGC 235 Query 9937 CAGCTCAGCGTCGCGCGCATGGAGCACGGTCGGGGTGCCGTCGGGCTTCTTGTCGATCAG 9996 ||||| | |||||| || || || || | || ||||||||||| || |||||||||| Sbjct 234 AAGCTCGGAGTCGCGGGCGTGAAGAACTGCAGGTGTGCCGTCGGGTTTTTTGTCGATCAA 175 Query 9997 GTGGATGATGGAATGGCGGATAGGCAT-GGCT 10027 ||||| |||| |||| ||||| ||||| |||| Sbjct 174 GTGGACGATGCAATGACGGATCGGCATAGGCT 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 208484375315944