Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq611 96.9 3e-15 seq871 87.8 2e-12 seq616 87.8 2e-12 seq4364 82.4 7e-11 >seq611 Length=17302 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | || || ||||| | ||||| || | |||||| |||| | || | Sbjct 9864 AATGCAAATCTTCGTGAAAACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGGCTTC 9805 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||||||| | || || ||||| ||||| ||||| || || || ||||| Sbjct 9804 GGACACCATCGAGAATGTGAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCAGATCA 9745 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | ||||| | || ||| || || ||||| |||| | | | || ||||| || Sbjct 9744 GCAGCGCCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTCTCGGACTACAA 9685 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||| || || || || ||| ||||||| ||||| | ||| | ||||| Sbjct 9684 CATCCAGAAGGAGTCGACTCTCCATCTCGTCCTTCGTCTTCGCGGAGG 9637 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || || ||||| || ||||||| |||| | ||| | Sbjct 4846 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACGATCACACTCGAGGTCGAAGGATCG 4787 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | || || ||||| ||||| ||||| || || || || || Sbjct 4786 GACACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGAATTCCCCCAGACCAG 4727 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | |||| || || || || || ||||||| | | | | || |||||| ||| Sbjct 4726 CAGCGATTGATTTTCGCTGGAAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAAC 4667 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACT 26986 || || || || || ||| ||||||| ||||| |||| Sbjct 4666 ATCCAGAAGGAGTCGACTCTCCATCTTGTCCTCCGACT 4629 >seq871 Length=2590 Score = 87.8 bits (96), Expect = 2e-12 Identities = 152/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 26760 TCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTA 26819 |||| | |||||| | || || || || | || || || |||||||| | ||| | Sbjct 490 TCAATCGCAATGCAGATCTTCGTGAAGACCCTCACCGGGAAGACGATCACCCTGGAAGTG 549 Query 26820 GAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCT 26879 ||| |||| ||||||| | || || ||||| ||||||||||| || || Sbjct 550 GAAGGTTCTGACAGCATCGAGAACGTAAAGGCGAAGATCCAGGACAAAGAAGGTATTCCC 609 Query 26880 CCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC 26939 || ||||| || | | || | || ||| || || |||||||| | ||| | ||| | Sbjct 610 CCTGATCAGCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAAGACGGCCGAACCCTCAAC 669 Query 26940 GACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| ||||| ||||| ||||| ||| | ||||| || || Sbjct 670 GACTACAACATCCAAAAGGAATCGACTTTGCATCTCGTGCT 710 >seq616 Length=1528 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || || ||||| | || || || |||||||| | ||| | ||| Sbjct 594 AATGCAGATCTTCGTCAAAACGCTCACCGGCAAGACGATCACCTTGGAAGTGGAAGGCTC 535 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||||||| | || || ||||| ||||| ||||| || || || || || Sbjct 534 GGACACCATCGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGAATCCCCCCAGACCA 475 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | ||||||| || ||| || || || || |||| | | | | ||||| || Sbjct 474 GCAGCGCCTCATTTTCGCCGGAAAGCAGCTTGAGGATGGCCGCACCCTTTCGGACTACAA 415 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||| || |||||||| || ||||||| ||||| |||| | ||||| Sbjct 414 CATCCAGAAAGAATCCACCCTCCATCTCGTCCTCCGACTCCGCGGAGG 367 >seq4364 Length=177085 Score = 82.4 bits (90), Expect = 7e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || || || || | ||||| || |||||||| | ||| | || Sbjct 157147 AATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACGATCACCCTGGAAGTCGAGGGTTC 157088 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||| ||| | || || ||||| ||||||||||| || ||||| ||||| Sbjct 157087 GGACACCATTGAGAACGTGAAGGCCAAGATCCAAGACAAAGAAGGCATTCCTCCAGATCA 157028 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | | || | || ||| || || |||||||| | | | | || ||| || || Sbjct 157027 GCAGCGTTTGATCTTCGCCGGAAAGCAGCTCGAAGACGGTCGCACTCTCTCCGATTACAA 156968 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| || || ||||| || ||||||| || || ||||| | || |||| Sbjct 156967 CATCCAGAAGGAATCGACCCTCCATCTCGTACTCCGACTTCGCGGTGGAA 156918 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478627493544480