Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq5716 113 1e-19
>seq5716
Length=132174
Score = 113 bits (124), Expect = 1e-19
Identities = 199/283 (70%), Gaps = 8/283 (3%)
Strand=Plus/Plus
Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606
|| || ||||| |||| || | | |||||| |||||| | || ||||| ||| |||
Sbjct 121264 TTTACACACGCATCGCCTACGCTTTTCAATGCCGGAACTTGCAAACCACAAATGAGCTCT 121323
Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGA-A 363665
||||| || || | |||| | ||||| |||||||| || || ||| ||| | | ||| |
Sbjct 121324 TGCTTCCTACTCACAATGCATGACGACTCCATCGATGGAAT-TTTCACAACCCTCAGACA 121382
Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGT 363723
||||||||||| || ||| || || || |||| || | || |||| || ||||
Sbjct 121383 ATGTGCTCTTATCTCAAAGTCCGCCGGAGGTATTG--GTTTGAATGCACATTGTATTCGG 121440
Query 363724 GCA-CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCT 363782
||| | | | | | ||| || || ||| || ||||| || ||||||||||
Sbjct 121441 GCATCTGGAACGAT-GATTGCTGGTACGAATGGAACTTCAAATGGTCTTATTCCCATGCT 121499
Query 363783 TCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGA 363825
||| || | ||||||||||| | || || ||||||||||||
Sbjct 121500 TCGGGTATACAACAATACTGCGCGATATGTGGACCAGGGTGGA 121542
Score = 98.7 bits (108), Expect = 3e-15
Identities = 153/216 (71%), Gaps = 7/216 (3%)
Strand=Plus/Plus
Query 363443 TTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATG 363502
||||||| || || ||||| || | ||||| || ||| | |||||||| | |||
Sbjct 120991 TTGTTGAGCGTCCACAGCACTTGCTGATGCGAGTCGCTGTGGGTATCCA---CAAAGATT 121047
Query 363503 ---TTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCA 363559
|||| ||||| |||||||| || || || | | ||| || || ||||| |
Sbjct 121048 CAATTGAAGCCGCTATTGAAACTTACAACCTAATGTCCGATCGCTGGTTTACACACGCAA 121107
Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619
|||| || | | |||||| |||||| | || ||||| ||| ||||||||||| || |
Sbjct 121108 CGCCTACGCTTTTCAATGCCGGAACTTGCAAACCACAAATGAGCTCTTGCTTTCTACTCA 121167
Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACA 363655
|||| | ||||| |||||||| || || ||| |||
Sbjct 121168 CAATGCATGACGACTCCATCGATGGAAT-TTTCACA 121202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303256176762188
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |