Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5716 113 1e-19 >seq5716 Length=132174 Score = 113 bits (124), Expect = 1e-19 Identities = 199/283 (70%), Gaps = 8/283 (3%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || ||||| |||| || | | |||||| |||||| | || ||||| ||| ||| Sbjct 121264 TTTACACACGCATCGCCTACGCTTTTCAATGCCGGAACTTGCAAACCACAAATGAGCTCT 121323 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGA-A 363665 ||||| || || | |||| | ||||| |||||||| || || ||| ||| | | ||| | Sbjct 121324 TGCTTCCTACTCACAATGCATGACGACTCCATCGATGGAAT-TTTCACAACCCTCAGACA 121382 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATG--TTCGT 363723 ||||||||||| || ||| || || || |||| || | || |||| || |||| Sbjct 121383 ATGTGCTCTTATCTCAAAGTCCGCCGGAGGTATTG--GTTTGAATGCACATTGTATTCGG 121440 Query 363724 GCA-CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCT 363782 ||| | | | | | ||| || || ||| || ||||| || |||||||||| Sbjct 121441 GCATCTGGAACGAT-GATTGCTGGTACGAATGGAACTTCAAATGGTCTTATTCCCATGCT 121499 Query 363783 TCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGA 363825 ||| || | ||||||||||| | || || |||||||||||| Sbjct 121500 TCGGGTATACAACAATACTGCGCGATATGTGGACCAGGGTGGA 121542 Score = 98.7 bits (108), Expect = 3e-15 Identities = 153/216 (71%), Gaps = 7/216 (3%) Strand=Plus/Plus Query 363443 TTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATG 363502 ||||||| || || ||||| || | ||||| || ||| | |||||||| | ||| Sbjct 120991 TTGTTGAGCGTCCACAGCACTTGCTGATGCGAGTCGCTGTGGGTATCCA---CAAAGATT 121047 Query 363503 ---TTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACGCACGCCA 363559 |||| ||||| |||||||| || || || | | ||| || || ||||| | Sbjct 121048 CAATTGAAGCCGCTATTGAAACTTACAACCTAATGTCCGATCGCTGGTTTACACACGCAA 121107 Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619 |||| || | | |||||| |||||| | || ||||| ||| ||||||||||| || | Sbjct 121108 CGCCTACGCTTTTCAATGCCGGAACTTGCAAACCACAAATGAGCTCTTGCTTTCTACTCA 121167 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACA 363655 |||| | ||||| |||||||| || || ||| ||| Sbjct 121168 CAATGCATGACGACTCCATCGATGGAAT-TTTCACA 121202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303256176762188