Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_007710.1
Length=46643
Score E
Sequences producing significant alignments: (Bits) Value
seq5140 105 2e-18
>seq5140
Length=7192
Score = 105 bits (116), Expect = 2e-18
Identities = 248/370 (67%), Gaps = 6/370 (2%)
Strand=Plus/Minus
Query 35441 TTGCAGGTGAAGTTGCTCGACCCGCGTTTCGGCGATCTGTGGCCGTTGCCGGCCTATGCC 35500
||||| | ||| | |||||||| || ||||| | | || |||||||||| |||
Sbjct 3116 TTGCAAGCCAAGATCCTCGACCCACGCATCGGCAACGAATTCCCACTGCCGGCCTACGCC 3057
Query 35501 ACCGAAGCCAGTGCAGGCATGGACCTGCGTGCCGCACTGGAGGC-GCCGATGACGTTGCA 35559
||| || | || ||| | || ||||| ||| || ||| | | || | ||| |
Sbjct 3056 ACCCCAGGCTCCGCCGGCCTCGATCTGCGCGCCATGCTCAAGGAAGACACTGTCCTTG-A 2998
Query 35560 GCCGGGCGATGCGGCGCTGATTCCCAGCGGCATCGCGATCCATCTGGCCGACCCGCAGCT 35619
||||||| | | || ||||| | |||| | ||||| | | | ||| || ||
Sbjct 2997 GCCGGGCCAGACCATTCTTATTCCGACCGGCTTGTCGATCTACGTAGGCGATCCTGGCCT 2938
Query 35620 GTGCGCGGTGATCCTGCCGCGCTCGGGGCTTGGCCATCGTCACGGCATCGTACTCGGCAA 35679
| || |||||||||||||||| || || |||||| ||||||||||| | |||||
Sbjct 2937 GGCAGCCCTGATCCTGCCGCGCTCTGGCCTGGGCCATAAACACGGCATCGTGTTGGGCAA 2878
Query 35680 C--GGTACCGGCCTCATCGATGCGGATTACCAGGGGTCGTTGTTGATCAGCACCTGGAAT 35737
| ||| |||||| |||||| |||| |||||||| || || | ||||||
Sbjct 2877 CCTGGT--CGGCCTGATCGATTCGGACTACCAGGGCGAACTGATGGTGTCATGCTGGAAC 2820
Query 35738 CGCGGCCGCGAGGCCTTCACCATCGAGCCGGGCGACCGGATTGCGCAGCTGGTGATCCTG 35797
|| |||| || |||| ||||| ||||| || ||||| ||| |||| | ||
Sbjct 2819 CGTGGCCAGACCGCGTTCAACATCGCTGTCGGCGAACGCATTGCCCAGTTGGTACTGGTG 2760
Query 35798 CCGGTCGTGC 35807
||||| ||||
Sbjct 2759 CCGGTGGTGC 2750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 149125668044340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |