Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_007710.1 Length=46643 Score E Sequences producing significant alignments: (Bits) Value seq5140 105 2e-18 >seq5140 Length=7192 Score = 105 bits (116), Expect = 2e-18 Identities = 248/370 (67%), Gaps = 6/370 (2%) Strand=Plus/Minus Query 35441 TTGCAGGTGAAGTTGCTCGACCCGCGTTTCGGCGATCTGTGGCCGTTGCCGGCCTATGCC 35500 ||||| | ||| | |||||||| || ||||| | | || |||||||||| ||| Sbjct 3116 TTGCAAGCCAAGATCCTCGACCCACGCATCGGCAACGAATTCCCACTGCCGGCCTACGCC 3057 Query 35501 ACCGAAGCCAGTGCAGGCATGGACCTGCGTGCCGCACTGGAGGC-GCCGATGACGTTGCA 35559 ||| || | || ||| | || ||||| ||| || ||| | | || | ||| | Sbjct 3056 ACCCCAGGCTCCGCCGGCCTCGATCTGCGCGCCATGCTCAAGGAAGACACTGTCCTTG-A 2998 Query 35560 GCCGGGCGATGCGGCGCTGATTCCCAGCGGCATCGCGATCCATCTGGCCGACCCGCAGCT 35619 ||||||| | | || ||||| | |||| | ||||| | | | ||| || || Sbjct 2997 GCCGGGCCAGACCATTCTTATTCCGACCGGCTTGTCGATCTACGTAGGCGATCCTGGCCT 2938 Query 35620 GTGCGCGGTGATCCTGCCGCGCTCGGGGCTTGGCCATCGTCACGGCATCGTACTCGGCAA 35679 | || |||||||||||||||| || || |||||| ||||||||||| | ||||| Sbjct 2937 GGCAGCCCTGATCCTGCCGCGCTCTGGCCTGGGCCATAAACACGGCATCGTGTTGGGCAA 2878 Query 35680 C--GGTACCGGCCTCATCGATGCGGATTACCAGGGGTCGTTGTTGATCAGCACCTGGAAT 35737 | ||| |||||| |||||| |||| |||||||| || || | |||||| Sbjct 2877 CCTGGT--CGGCCTGATCGATTCGGACTACCAGGGCGAACTGATGGTGTCATGCTGGAAC 2820 Query 35738 CGCGGCCGCGAGGCCTTCACCATCGAGCCGGGCGACCGGATTGCGCAGCTGGTGATCCTG 35797 || |||| || |||| ||||| ||||| || ||||| ||| |||| | || Sbjct 2819 CGTGGCCAGACCGCGTTCAACATCGCTGTCGGCGAACGCATTGCCCAGTTGGTACTGGTG 2760 Query 35798 CCGGTCGTGC 35807 ||||| |||| Sbjct 2759 CCGGTGGTGC 2750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149125668044340