Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq616 84.2 2e-11
>seq616
Length=1528
Score = 84.2 bits (92), Expect = 2e-11
Identities = 160/232 (69%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768
||||| || || | || || | ||| || ||||| || || || ||||||||||| |
Sbjct 367 CCTCCGCGGAGTCGGAGGACGAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGTCCGAA 426
Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828
| ||| | | ||||| | || || || || |||| || ||||| ||||| ||
Sbjct 427 AGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGGTCTGGGGGG 486
Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGC--TC 16884
| || || ||||| || || || |||||| | | | ||||| || || ||
Sbjct 487 ATTCCTTCCTTGTCTTGGATCTTGGC--CTTCACGTTCTCGATGGTGTC--CGAGCCTTC 542
Query 16885 CGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936
| ||||| |||||| || || ||||| ||||||||||| || |||||||||
Sbjct 543 CACTTCCAAGGTGATCGTCTTGCCGGTGAGCGTTTTGACGAAGATCTGCATT 594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405059197483660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |