Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq5071 105 7e-18
>seq5071
Length=368534
Score = 105 bits (116), Expect = 7e-18
Identities = 295/453 (65%), Gaps = 0/453 (0%)
Strand=Plus/Plus
Query 93077 TAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCA 93136
|| |||||||| | ||| || |||||| ||||| ||||| || || || || | ||
Sbjct 135086 TACTTGTACATGAGGCATGCGAAGTCGCGATGTAGGCCTTCATCCCGGGAAATGAGTTCG 135145
Query 93137 TTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA 93196
|||||| || | || || | || || || || || | ||| ||||| | ||| ||
Sbjct 135146 TTGCTGTGGGTGAGGCCAGGCATGAGACCACGCTTTTTCAACCAGAATATGGCAGCGAAC 135205
Query 93197 CTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTT 93256
|| || || || || || ||||| || || || || | | |||| | ||
Sbjct 135206 GATCCTGAGAAGAAAATGCCCTCCACAGCAGCGAAGGCGATCACACGTGTTCCGAACGAC 135265
Query 93257 GCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGT 93316
||| || | |||||| | ||||| || ||||| || || || || || | |
Sbjct 135266 GCGTTCTTGTCACCGATCCAACGAAGCGCCCAGTCAGCTTTCTTTTTGATGCATGGGAAT 135325
Query 93317 GTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATT 93376
|| ||| ||||| || || | | ||| | ||| | ||| | || ||
Sbjct 135326 TCTTGGATGGCGTTGAAGAGCTTGTTCTTCTCACGAGGATCGGTCACGTAGGCCTCAATC 135385
Query 93377 AACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACAT 93436
| | || ||||||||||| || | ||| | || |||||||| | |||||| |
Sbjct 135386 ATCTTCGAGTACATTTCAGAGTGAATCCCCTCGACGGCGATTTGGAAGCTGTAGAACGAA 135445
Query 93437 CTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496
|| |||| |||| || ||||||| || | || | ||||||||||||||| ||
Sbjct 135446 AGGGCCTCCGGCATCTTGACCTCTTGAGTGAAACGATCGATGAGATTTTCATTGACGATG 135505
Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATATATGC 93529
||||| |||||||| || || ||||||| ||||
Sbjct 135506 CCATCTGATGCTGCGAAGAATGCCAATACATGC 135538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556820190926160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |