Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq5071 105 7e-18 >seq5071 Length=368534 Score = 105 bits (116), Expect = 7e-18 Identities = 295/453 (65%), Gaps = 0/453 (0%) Strand=Plus/Plus Query 93077 TAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCA 93136 || |||||||| | ||| || |||||| ||||| ||||| || || || || | || Sbjct 135086 TACTTGTACATGAGGCATGCGAAGTCGCGATGTAGGCCTTCATCCCGGGAAATGAGTTCG 135145 Query 93137 TTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAA 93196 |||||| || | || || | || || || || || | ||| ||||| | ||| || Sbjct 135146 TTGCTGTGGGTGAGGCCAGGCATGAGACCACGCTTTTTCAACCAGAATATGGCAGCGAAC 135205 Query 93197 CTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTT 93256 || || || || || || ||||| || || || || | | |||| | || Sbjct 135206 GATCCTGAGAAGAAAATGCCCTCCACAGCAGCGAAGGCGATCACACGTGTTCCGAACGAC 135265 Query 93257 GCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGT 93316 ||| || | |||||| | ||||| || ||||| || || || || || | | Sbjct 135266 GCGTTCTTGTCACCGATCCAACGAAGCGCCCAGTCAGCTTTCTTTTTGATGCATGGGAAT 135325 Query 93317 GTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATT 93376 || ||| ||||| || || | | ||| | ||| | ||| | || || Sbjct 135326 TCTTGGATGGCGTTGAAGAGCTTGTTCTTCTCACGAGGATCGGTCACGTAGGCCTCAATC 135385 Query 93377 AACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACAT 93436 | | || ||||||||||| || | ||| | || |||||||| | |||||| | Sbjct 135386 ATCTTCGAGTACATTTCAGAGTGAATCCCCTCGACGGCGATTTGGAAGCTGTAGAACGAA 135445 Query 93437 CTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATA 93496 || |||| |||| || ||||||| || | || | ||||||||||||||| || Sbjct 135446 AGGGCCTCCGGCATCTTGACCTCTTGAGTGAAACGATCGATGAGATTTTCATTGACGATG 135505 Query 93497 CCATCGGATGCTGCaaaaaaaGCCAATATATGC 93529 ||||| |||||||| || || ||||||| |||| Sbjct 135506 CCATCTGATGCTGCGAAGAATGCCAATACATGC 135538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556820190926160