Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq5071 141 2e-28 >seq5071 Length=368534 Score = 141 bits (156), Expect = 2e-28 Identities = 419/633 (66%), Gaps = 11/633 (2%) Strand=Plus/Minus Query 42397 ACGAAAAGTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCA 42456 ||||| |||||||| || | || |||| |||||||| || || || ||||| |||| Sbjct 135557 ACGAACAGTTTTTCATCTCGCATGTATTGGCATTCTTCGCAGCATCAGATGGCATCGTCA 135498 Query 42457 ATGAGAACCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCT 42516 |||| || || | | |||| ||||||| || ||||| | | |||| Sbjct 135497 ATGAAAATCTCATCGATCGTTTCACTCAAGAGGTCAAGATGCCGGAGGCCCTTTCGTTCT 135438 Query 42517 ACGGCTTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACA 42576 || ||||||| || ||| | ||| | |||||||| ||||| | || || | | Sbjct 135437 ACAGCTTCCAAATCGCCGTCGAGGGGATTCACTCTGAAATGTACTCGAAGATGATTGAGG 135378 Query 42577 CGTACATCCTGGATCC-CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCC 42635 | ||| | ||||| ||| ||| ||| ||| ||||| ||||| | | || ||| Sbjct 135377 CCTACGTGACCGATCCTCGT-GAGAAGAACAAGCTCTTCAACGCCATCCA-AGAATTCCC 135320 Query 42636 -TGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGT 42693 |||||||| ||||| || ||||||||||| ||||||| | | | || ||| ||| Sbjct 135319 ATGCATCAAAAAGAAAGCTGACTGGGCGCTTCGTTGGATCG-GTGACAAGAACGCGTCGT 135261 Query 42694 TCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCG 42753 |||| | || | ||||| | || || |||||||| |||||||| || | |||| Sbjct 135260 TCGGAACACGTGTGATCGCCTTCGCTGCTGTGGAGGGCATTTTCTTCTCAGGATCGTTCG 135201 Query 42754 CCTCCATCTTCTGGCTCAAGCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAA 42812 | |||| |||||| | || || ||| || ||||| || |||||| | |||||| Sbjct 135200 CTGCCATATTCTGGTTGAAAAAGCGTGGTCTC-ATGCCTGGCCTCACCCACAGCAACGAA 135142 Query 42813 CTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCAC 42872 ||||| | |||| || || || ||| | ||||| || |||||| ||| | || | Sbjct 135141 CTCATTTCCCGGGATGAAGGCCTACATCGCGACTTCGCATGCCTCATGT--ACAAGTACC 135084 Query 42873 CTCAGGCACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATC 42932 | | | || | | ||| || || ||| ||| |||||||| ||| Sbjct 135083 TTGATGAGAAACCGAACCAAGAAG-AAGTAAACATCATTATCCGAGAGGCCGTAACCATC 135025 Query 42933 GAGAAGGAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTC 42992 |||||||||| | || || || || || ||| | || | || |||||| || Sbjct 135024 GAGAAGGAGTATTTGACCCAATCCCTTCCTGTGGACATGATTGGGATGAACTGTCGTCTT 134965 Query 42993 ATGTGCAAGTACATCCAGTACGTCGCCGACCAT 43025 |||| | |||||| | ||||||||||||||| Sbjct 134964 ATGTCTACATACATCGAATACGTCGCCGACCAT 134932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944270334063840