Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_009235.2
Length=48674
Score E
Sequences producing significant alignments: (Bits) Value
seq1811 237 5e-58
>seq1811
Length=36858
Score = 237 bits (262), Expect = 5e-58
Identities = 694/1054 (66%), Gaps = 35/1054 (3%)
Strand=Plus/Plus
Query 2568 CGGTCCTGCAAAACTGCGTCACGCTGCTGGCGGAAAGCATCGCGCAGTTGCCGGTCGAAC 2627
|| ||||||| ||||||||||| ||||| || ||||||||||| |||||||| | || |
Sbjct 16061 CGATCCTGCAGAACTGCGTCACTCTGCTCGCTGAAAGCATCGCTCAGTTGCCCCTGGAGC 16120
Query 2628 TGTATGAGCGCTCCGGCGACG---ACCGAAAGCCGGCGACCGATCATCCGCTGTATTCGA 2684
|||| || | || | | || || | || | | | |||||||| || |||
Sbjct 16121 TGTACATCCGGAAAGACGGTGGTCAGCGGGAGTCAGCTATCAACCATCCGCTTTA--CGA 16178
Query 2685 T--CCTGAAGTACGAGCCGAACCCGTGGCAAACGCCATTTGAGTATCAGGAGCAGTCGCA 2742
| |||| |||| |||| ||| || ||||| || | |||||| | ||| |||||
Sbjct 16179 TGTCCTGCGGTACCAGCCCAACGGGTTCCAAACCCCGTATGAGTACCGGGAATGTTCGCA 16238
Query 2743 -GGTGGCCGTGGGCCTTCGCGGCAATAGCTACAGCTTCATCGATCGCGATCAGGACGG-- 2799
|| || ||||| | | ||||||||| |||||||||||| ||| | |||||
Sbjct 16239 AGGCTTCCTTGGGC-TCAGGGGCAATAGCATCAGCTTCATCGACCGCCGGGAAGACGGAA 16297
Query 2800 -CGTGATTCAGGGA-CTGTATCC----GCTCGACAACGAAGCCGTGACGGTCATGAAGGG 2853
||| | | | | ||| | || || || || | | ||| ||||||||||
Sbjct 16298 ACGT--TGCCGCGCTCTGGAACCTGCAGCCTGAAAAGGTTG---TGA---TCATGAAGGG 16349
Query 2854 ACCGGACCTGAAGCCGATGTATCGCGTGGCCGGCGCCGATCCGCTGCCGCAGCGGCTCGT 2913
||| || || || ||| | ||| | || || ||||| |||| | |
Sbjct 16350 TAGCGACATGCTTCCTTACTACCGCATATGCGGTGGTGAGGCGTTGCCGATGCGGATGAT 16409
Query 2914 TCATCATGTTCGATGGATGTCGATCAATGGGTATACGGGCCTGTCTCCGGTCTTGCTGCA 2973
|||||| ||||| ||| | | |||| |||| ||| ||||| || | ||||
Sbjct 16410 TCATCACGTTCGTTGGTTCAGTACCAATCAGTATGTGGGGCTGTCGCCAATTGAAGTGCA 16469
Query 2974 TGCGAATGCGATCGGGCACGCACAGGCGATCCAGCAGTACGCAGGCAAATCGTTCATGAA 3033
|||| | | | |||| || ||||| | ||||||| | ||||| || ||
Sbjct 16470 TGCGGAGTCCCTAGGGCTGGCCCAGGCCGTTAGGCAGTACACCGGCAAGAGCTTTGCCAA 16529
Query 3034 CGG---CACGGCGCTGTCGGGGGTCATTGAACGGCCGACAGACGCGCCTGCCTTGAAGGA 3090
|| ||||| ||||||| || || || || || || || || || | |||||
Sbjct 16530 TGGTGTCACGG---TGTCGGGCGTGATCGAGCGCCCCCGTGAAGCCCCGGCGATCAAGGA 16586
Query 3091 TCAGGCAAGCGTTGATCGCATCACCGACGGCTGGAACGCGAAGTTCGGCGGGTCCGGTAA 3150
||||| ||| | || ||| ||| ||| |||||| ||||| | ||
Sbjct 16587 TCAGGGAAGTATCGACAAGATCGTCGATCAGTGGGGGCAGAAGTTTGGCGGCATGGACAA 16646
Query 3151 CGCGAAGAAGGTCGCGCTGTTGCAGGAGGGCATGAAGTTCAAGCCGCTGTCGATGACCAA 3210
||| |||||||| |||||| | || ||||| |||| ||||| || | || |||| |||
Sbjct 16647 CGCCAAGAAGGTGGCGCTGCTTCAAGAGGGGATGACTTTCAAACCCGTCTCCATGAACAA 16706
Query 3211 CGTCGACGCGGCGCTGATCG--ATGCATTGCGACTGTCGGCGCTCGATATCGCGCGGATC 3268
||| || |||| | | | | || | | | || |||| | |||||| || |||||
Sbjct 16707 CGTTGATGCGGAGGTACTGGGGATCC-TCAAGGCTACCGGCAC-CGATATTGCCAGGATC 16764
Query 3269 TACAAAATCCCGGCTCACATGGTCAACGAGCTGGAGCGGGCGACGTTCAGCAACATCGAG 3328
||||| || || | |||||| ||||| |||||| | | | | || || | | ||
Sbjct 16765 TACAAGATTCCATTGCCCATGGTGAACGACCTGGAGAAGTCCAATTACAACACCCTGGAA 16824
Query 3329 CATCAGTCGCTCCAGTTCGTGATCTACACGCTGCTGCCGTGGGTGAAACGGCATGAACAG 3388
|| | | ||||||| ||| | | | ||||||| |||||||| || || ||||||
Sbjct 16825 CAGCTCATGATCCAGTTTGTGGTGTTCGGCTTGCTGCCCTGGGTGAAGCGTCACGAACAG 16884
Query 3389 GCGAAGACGCGCGACCTGCTCTTGCCGTCGGAGCGCAAGCAGTACTTCATTGAATACAAC 3448
|| | || |||||| | || ||| ||| || | |||||||||| || | ||||
Sbjct 16885 GCAATGATGCGCGATTTTCTGCTGCTCAAGGATCGGCGGGAGTACTTCATCGAGTTCAAC 16944
Query 3449 CTCGCGGGGCTCTTGCGCGGCGATCAGTCGTCGCGCTACGCCGCGTATGCGGTCGGGCGC 3508
||| | || || |||||||||| ||| | ||||||| || ||||| | || ||
Sbjct 16945 CTCTCCGGCCTGCTGCGCGGCGACCAGAAGAGCCGCTACGAGGCATATGCCATTGGCCGG 17004
Query 3509 CAGTGGGGGTGGCTGTCGATCAACGACATTCGGCGGCTGGAGAACATGCCGCCGGTCAAG 3568
|| ||||| ||| || | || ||||| || || ||||| ||||||||||| ||
Sbjct 17005 CAATGGGGCTGGTTGAGTGTAAATGACATCCGCCGCCTGGAAAACATGCCGCCTGTACCT 17064
Query 3569 GGCGGCGACATCTACCTGAGTCCGATGAACATGG 3602
|| ||||| ||||| ||| ||| |||||||||
Sbjct 17065 GGTGGCGATATCTATCTGCAACCGTTGAACATGG 17098
Score = 199 bits (220), Expect = 1e-46
Identities = 632/951 (66%), Gaps = 44/951 (5%)
Strand=Plus/Plus
Query 5136 GAAGTCGCAATGTCGCTTAATACCCTTTCGCCGGGCGCTGGCGGCGTCCTGGTGCCTGAG 5195
|| || || ||| |||| || || | |||| || ||||| || || ||||||||| ||
Sbjct 18580 GATGTAGCCATGGCGCTGAACACTGTAACGCCAGGTGCTGGTGGGGTTCTGGTGCCTCAG 18639
Query 5196 AACCTGTCGAGCGAGGTCATCGAACTGCTGCGTCCGAAGTCCGTCGTTCGCAAGCTCGGC 5255
||| | ||| ||| |||| ||| |||||| || | ||| ||||| ||||| | ||
Sbjct 18640 AACTTTGCGACAGAGATCATTGAAGCGCTGCGCCCCATGTCGGTCGTGCGCAAAATGGGT 18699
Query 5256 GCGCGCACGCTGCCGCTCTCGAACGGCAACATCACTATCCCGCGCCTGAAGGGCGGTGCG 5315
|| || | |||||||| ||||||||| | || ||||| | | || ||
Sbjct 18700 GCCCGAAGCCTGCCGCTAAACAACGGCAACCTGACGCAGCCGCGAATTACCGGTAACACG 18759
Query 5316 ATCGTCGGCTACATCGGCGCTGACACCGATATCCCGACGACACA---ACAGCAGTTCGAC 5372
||||| |||||||| ||||| |||||||||||| | ||| | || ||||
Sbjct 18760 GTCGTCACTTACATCGGTGCTGATACCGATATCCCG--GTCACTGGTATGACA-TTCGCT 18816
Query 5373 GATTTGAAACTGACGGCGAAGAAGATGGCTGCGCTGGTACCAATCGCCAACGATCTCAT- 5431
||| || ||| | |||||||| ||| || | || || ||| |||| || || ||
Sbjct 18817 GATACCAAGCTGTCTGCGAAGAAAGCGGCGGCAATTGTTCCGATCTCCAATGACCTGATT 18876
Query 5432 -CAAGTACGCCGGCGTGAATCC--GAACGTCGATCAGATCGTGGTTGGCGACCTCACCGC 5488
||| |||| ||||| | || |||| ||| | ||||| || | || || |
Sbjct 18877 GCAA--ACGCTGGCGTCAGCCCACGAAC--CGACGACATCGTCGTCAGTGATCTGGTTGT 18932
Query 5489 GGCGATCGGTGCACGCG-AAGACAAGGCGTTTATTCGCGACGACGGCA-CGGCAAACACG 5546
| |||| || || || ||||| | ||||| || ||| || | ||||| | |
Sbjct 18933 GTCGATGGG-GCTTTCGGAAGACCTGCACTTTATCCGTTCCGATGGTAGCGGCACGCT-G 18990
Query 5547 CCGAAGGGCCTCCGCTTCTGGGCACTCCCCGGT-AACGTCATTACGGCAAGCGACG--GC 5603
|| ||||| | || | |||||| | | || | ||||| | | || ||| | ||
Sbjct 18991 CCCAAGGGGATGCGTTACTGGGCCC-CGGCGTTCAACGTGTTGCCCGCGCCCGATGCTGC 19049
Query 5604 -----TCGACGTTGCAGAAGATCGAAACGGACCTCGGCAAAGCCATTCT-CGCGCTCGAA 5657
|| || || |||||||||| | | |||| || || ||| ||||||
Sbjct 19050 AAACATC-ACCCTGGAGAAGATCGATCTGTTCTGCGGCGGCATGATGCTTCGC-CTCGAA 19107
Query 5658 AATGCCGACGCCAATCTGACGCAGCC-TGGCTGGATCATGGCCCCGCGTACGTTCCGCTT 5716
| ||| ||| | ||| | ||| ||||||| | ||| |||||| || || |
Sbjct 19108 ACGGCCAACGTGATGATGAAG-AGCTGTGGCTGGTTGATGCATCCGCGTGTCTTTCGTTG 19166
Query 5717 CCTCGAAGGTC--TGCGTGACGGGAACGGCAACAAGGTCTATCCGGAACTCGCCAACGGC 5774
|| | ||| |||| || || || |||||||||| ||||||||| | | | |||
Sbjct 19167 GCTGCA--GTCGTTGCGCGATGGCAATGGCAACAAGGCGTATCCGGAAATTGAACAGGGC 19224
Query 5775 ATGCTGAAGGGCTACCCGGTAGGCAAAACCACGCAAGTGCCGATCAATCTCGGTGAAGCC 5834
|| | |||||||| ||||| ||| | || || | ||| | || ||||| | |
Sbjct 19225 TTGTTCAAGGGCTATCCGGTGGGCCTGAGCAATCAGATCCCGGTAAACCTCGGGGCTGGT 19284
Query 5835 GGCAAAGAGTCGGAGATCTATTTCACCGACTTCGGCGACGTCTTCATCGGCGAGGAAGAA 5894
||||| ||| | || | || ||| | |||||| |||| | | |||||||| ||||
Sbjct 19285 GGCAACGAGACTGAATTTTACTTCGTCAACTTCGCCGACATGATGATCGGCGA---AGAA 19341
Query 5895 ACG---CTGGAGATCGACTACAGCAAGGAAGCCACCTACAAGGACGCCGATGGTCACATG 5951
| | ||| ||| | ||| | || || ||||||||||||| || || |||||
Sbjct 19342 ATGGACCTGACTATCTCGTTCAGTAGCGAGGCTTCCTACAAGGACGCTGACGGCAACATG 19401
Query 5952 GTCAGTGCGTTTCAGCGCGACCAGACGCTGATCCGGGTGATCGCAAAGAACGACTTCGGC 6011
|| |||||||| ||||| |||||||| ||| || ||| |||||||| ||||||| |||
Sbjct 19402 GTGAGTGCGTTCCAGCGTGACCAGACCCTGGTCAAGGTAATCGCAAAACACGACTTTGGC 19461
Query 6012 CCGCGTCACGTCGAGTCGATCG-CGGTGCTGTCCGGCGTGGCCTGGGGCGC 6061
||||||||||| || | |||| || ||| | |||||| ||||||||
Sbjct 19462 CCGCGTCACGTTGAATGCATCGTCGTTGCAAT-CGGCGTCAAGTGGGGCGC 19511
Score = 132 bits (146), Expect = 1e-26
Identities = 308/457 (67%), Gaps = 8/457 (2%)
Strand=Plus/Plus
Query 3975 GTGCGAGCCGATGACGAGCTACGAGGGGCTGCGTGCCGCGGTGAATCAGGCAGTGGCCGA 4034
||||||| ||||||| || || || | ||||| || || | || || |||||
Sbjct 17468 GTGCGAGACGATGACCAGTTATGAAAGCCTGCGGGCGCAACTGCGCAACGCGGTCGCCGA 17527
Query 4035 CCCCGCGGTCGAACACATCGTGCTCGATATCGACAGCAATGGCGGCAGCGCCACCGGCGC 4094
|| |||||| | |||||||||||||||||| ||| || || || || ||
Sbjct 17528 TCCGATGGTCGAGCGCATCGTGCTCGATATCGATAGCCCCGGTGGGTCTGCGGTGGGGGC 17587
Query 4095 GTTCGAACTGGCCGACGATATCCGGGCCGCGTCGCTGGTCAAGCCAATTACCGCGATCGT 4154
||| || |||| | || ||||| ||| | | | | || || || |||| |||||
Sbjct 17588 GTTTGAGTTGGCTGCTGACATCCGAGCCATGGCCCAGCAGAAACCGATCACCGGCATCGT 17647
Query 4155 GAACTTCTCGGCGTTCTCGGGCGGCTATCTGATTGCCGCTGCG-GCGTCGCAGGTCATCG 4213
||||| ||| | | |||||||||||| | | ||||| || | || | |||
Sbjct 17648 CAACTTTATGGCCTACAGCGGCGGCTATCTGCTCGGGGCTGCCTGCAGTG-AGCTGGTCG 17706
Query 4214 TGAGCCGCACGTCCGGCGTCGGGTCGATTGGCGTCATCGCGAACCATCTGGACGTGTCCA 4273
|||| | || ||| ||||| || ||||| || ||||| | ||| ||||| ||||
Sbjct 17707 TGAGTCAGACCAGCGGAGTCGGATCTATTGGTGTGATCGCCAGCCACATGGACCGTTCCA 17766
Query 4274 AACGTGACGAGCAGCAAGGGA-TCAAGGTGACGTCGGTGTTTGCCGGGGACCACAAGAAC 4332
| || || ||| ||| | |||||||| |||| ||||| || | ||| || ||
Sbjct 17767 AGATGGAAGAAG-GCATGGGCGTGAAGGTGACCACGGTTTTTGCTGGCGCCCATAAAAAT 17825
Query 4333 GATCTCACCCCGCACGAGCCGCTGAGCGATCAGTCGCTGGCGTTCCTCACCAGCATG--G 4390
||||| | ||| || |||||| ||||||||||||| ||| || ||| | | ||| |
Sbjct 17826 GATCTGAGCCCTCATGAGCCGTTGAGCGATCAGTCTCTGAAGTACCTGA--ATGATGTCG 17883
Query 4391 TGCAAAACAGCTACAAGCAGTTCGTCGATGCAATCGC 4427
|||| | ||||| ||| ||||| | || |||||
Sbjct 17884 TGCAGGAAAGCTATCAGCTCTTCGTTAACGCCATCGC 17920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 155624417787888
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