Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq871 161 2e-34 seq5007 159 8e-34 seq4364 156 1e-32 seq616 150 4e-31 seq611 136 9e-27 seq311 120 7e-22 seq4684 93.3 1e-13 seq3387 87.8 4e-12 seq3195 87.8 4e-12 seq3649 86.0 1e-11 seq3368 84.2 5e-11 seq1821 84.2 5e-11 >seq871 Length=2590 Score = 161 bits (178), Expect = 2e-34 Identities = 173/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | || |||||||| | || ||| |||||||| || |||||| Sbjct 726 TCCACCACGGAGACGGAGCACGAGATGCAAAGTCGATTCCTTTTGGATGTTGTAGTCGTT 667 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 ||| || || |||||||| | || ||||| |||||||||| |||||| ||| | || Sbjct 666 GAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCAGGGGG 607 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || |||||||| |||||||| ||||| || ||||| || || || ||| || Sbjct 606 AATACCTTCTTTGTCCTGGATCTTCGCCTTTACGTTCTCGATGCTGTCAGAACCTTCCAC 547 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||| || ||||||||||||||||| || ||||| ||||| ||||||||| Sbjct 546 TTCCAGGGTGATCGTCTTCCCGGTGAGGGTCTTCACGAAGATCTGCATT 498 >seq5007 Length=89527 Score = 159 bits (176), Expect = 8e-34 Identities = 178/235 (76%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || ||||| || | ||| |||||||| | || ||||| ||||| || |||| Sbjct 22256 CATG-CCTCCGCGCAGACGAAGGACGAGATGGAGGGTCGACTCTTTCTGGATGTTGTAGT 22314 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| ||||||||||||||| || | ||| ||||| |||||||| || ||||| || | Sbjct 22315 CGGAGAGCGTGCGTCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTG---GT 22371 Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 || ||||| ||||| || || ||||| || || |||||||| || || | |||| Sbjct 22372 CTGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAGC 22431 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || |||||||||||||||||||| || || || || || || |||||||| Sbjct 22432 CTTCGACCTCGAGCGTGATCGTCTTCCCTGTGAGGGTTTTCACAAAGATCTGCAT 22486 Score = 149 bits (164), Expect = 1e-30 Identities = 174/234 (74%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 288243 ATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTC 288302 || ||| || || || | ||| |||||||| | || ||||| || || || ||||| Sbjct 22028 ATTTCCCCCACGCAGACGAAGGACGAGATGGAGGGTCGACTCTTTCTGAATGTTGTAGTC 22087 Query 288303 GGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATC 288362 || ||||||||||||||| || | ||| ||||| |||||||| || ||||| || || Sbjct 22088 GGAGAGCGTGCGTCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTG---GTC 22144 Query 288363 T---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA 288419 | ||||| ||||| || || ||||| || || |||||||| || || | |||| Sbjct 22145 TGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAGCC 22204 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || |||||||||||||||||||| || || || || || || |||||||| Sbjct 22205 CTCAACCTCGAGCGTGATCGTCTTCCCTGTGAGGGTTTTCACAAAGATCTGCAT 22258 >seq4364 Length=177085 Score = 156 bits (172), Expect = 1e-32 Identities = 177/235 (75%), Gaps = 12/235 (5%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||||||||| |||| ||||||||||| | || ||| || ||||| || || |||| Sbjct 156919 TCCACCGCGAAGTCGGAGTACGAGATGGAGGGTCGATTCCTTCTGGATGTTGTAATCGGA 156978 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 ||| ||||| |||||||| | || ||||| |||||||||| |||||| || |||| Sbjct 156979 GAGAGTGCGACCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTG---ATCTGG 157035 Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA--- 288419 || || |||||||| || ||||| || || |||||||| || || | || ||| Sbjct 157036 AGGAATGCCTTCTTTGTCTTGGATCTTGGCCTTCACGTTCTCAATGGTGTC---CGAACC 157092 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || ||||| || ||||||||||| || || || ||||| ||||| ||||||||| Sbjct 157093 CTCGACTTCCAGGGTGATCGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATT 157147 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | ||||||||||| | || ||| || ||||| || ||||||| Sbjct 156658 TCCACCACGGAGACGGAGTACGAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGA 156717 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACG 288350 ||| ||||| |||||||| | || ||||| |||||||||| ||| Sbjct 156718 GAGGGTGCGACCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACG 156762 >seq616 Length=1528 Score = 150 bits (166), Expect = 4e-31 Identities = 176/235 (75%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || ||||| || | ||| ||||| || | || ||| || |||||||| |||| Sbjct 869 CATG-CCTCCGCGAAGCCGAAGGACGAGGTGGAGGGTCGATTCCTTCTGGATATTGTAGT 927 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| ||| ||||| || ||||| | || ||||| |||||||||| ||||| || | Sbjct 928 CGGAGAGGGTGCGACCATCTTCCAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGG---T 984 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 ||||| |||||||||||||||||||| || || |||||||| || || | ||| Sbjct 985 CTGGGGGAATTCCTTCTTTATCCTGGATCTTGGCCTTCACGTTCTCAATCGTGTCGGAGC 1044 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||| || ||||| ||||| || |||| ||||| || || |||||||| Sbjct 1045 CTTCCACTTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1099 Score = 141 bits (156), Expect = 2e-28 Identities = 177/239 (74%), Gaps = 13/239 (5%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || |||||||||| || |||||||| | ||| |||||| ||||| || |||| Sbjct 363 CATG-CCTCCGCGGAGTCGGAGGACGAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGT 421 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | || ||||| || || || | || ||||| ||||| || || ||||| || | Sbjct 422 CCGAAAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGG---T 478 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 ||||| |||||||| || || ||||| || || |||||||| || || | || || Sbjct 479 CTGGGGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCGATGGTGTC---CG 535 Query 288419 A---TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 | ||| ||||| | ||||||||||| ||||| || || |||||||| ||||||||| Sbjct 536 AGCCTTCCACTTCCAAGGTGATCGTCTTGCCGGTGAGCGTTTTGACGAAGATCTGCATT 594 Score = 131 bits (144), Expect = 4e-25 Identities = 174/238 (73%), Gaps = 13/238 (5%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || |||||||| | ||| |||||||| | || ||| || ||||| || |||| Sbjct 135 CATG-CCTCCGCGGAGCCGAAGGACGAGATGGAGGGTCGATTCCTTCTGGATGTTGTAGT 193 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| | ||||| || || || | || ||||| ||||| || || ||||| || | Sbjct 194 CGGACAAAGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGG---T 250 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415 ||||| ||||||||||| |||||||| || ||||| || ||||| || | ||| || Sbjct 251 CTGGGGGAATTCCTTCTTTGTCCTGGATCTTGGCTTTGACATTTTCGATGGTATCAGAGC 310 Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || || || |||||||| || || || ||||| ||||| |||||||| Sbjct 311 CC---TCGACCTCCAGGGTAATCGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 365 Score = 114 bits (126), Expect = 3e-20 Identities = 168/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || ||||| || | ||| |||||||| | || || || || || || |||| Sbjct 1097 CATG-CCTCCGCGAAGCCGAAGGACGAGATGGAGGGTTGACTCCTTCTGAATGTTGTAGT 1155 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| | ||||| || || || | || ||||| |||||||||| ||||| || | Sbjct 1156 CGGACAAAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGG---T 1212 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 |||| |||||||| || || ||||| || ||||| || || || || | || Sbjct 1213 CTGGAGGAATTCCTTCCTTGTCTTGGATCTTGGCTTTGACATTCTCGATGGTGTCAGAGC 1272 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| ||||| || || |||||||| ||||| || ||||||||||| |||||||| Sbjct 1273 CTTCAACTTCAAGAGTAATCGTCTTTCCGGTGAGCGTCTTGACGAAGATCTGCAT 1327 Score = 91.5 bits (100), Expect = 3e-13 Identities = 105/140 (75%), Gaps = 6/140 (4%) Strand=Plus/Plus Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT 288393 ||||| || || ||||| || |||||| ||||||||||| |||||||| || || Sbjct 1 GCGAAAATGAGGCGCTGCTGG---TCTGGGGGAATTCCTTCTTTGTCCTGGATCTTGGCC 57 Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 |||||||| || || | ||| ||| ||||| || ||||||||||| || |||| Sbjct 58 TTCACGTTCTCAATCGTGTCGGATCCTTCCACTTCCAGTGTGATCGTCTTGCCAGTCAAG 117 Query 288454 GTCTTGACGAATATCTGCAT 288473 ||||| || || |||||||| Sbjct 118 GTCTTCACAAAGATCTGCAT 137 >seq611 Length=17302 Score = 136 bits (150), Expect = 9e-27 Identities = 175/236 (74%), Gaps = 9/236 (4%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||||| || || ||||| | || || || ||||| || |||| Sbjct 4616 CATG-CCACCACGGAGTCGGAGGACAAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGT 4674 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| ||| ||||| || ||||| | || ||||| ||||| |||| ||||| || | Sbjct 4675 CGGAGAGGGTGCGACCATCTTCCAGCTGCTTTCCAGCGAAAATCAATCGCTGCTGG---T 4731 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC-GCTC 288417 ||||| |||||||| || || ||||| || || |||||||| || || | || | || Sbjct 4732 CTGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCGATGGTGTCCGATC 4791 Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || ||||| ||||||||||| || |||| ||||| ||||| |||||||| Sbjct 4792 C-TTCGACCTCGAGTGTGATCGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 4846 Score = 132 bits (146), Expect = 1e-25 Identities = 170/232 (73%), Gaps = 7/232 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || |||||||| | ||| || || || | ||| |||||| ||||| || |||| Sbjct 5950 CATG-CCTCCGCGGAGCCGAAGGACCAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGT 6008 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| | ||||| || || || | || || || ||||| ||||| ||||| || | Sbjct 6009 CGGACAAAGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGG---T 6065 Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 ||||| |||||||| ||||| |||||||| || |||||||| || || | || Sbjct 6066 CTGGGGGAATTCCTTCCTTATCTTGGATTTTGGCCTTCACGTTCTCAATCGTGTCAGAGC 6125 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTG 288470 ||| || || || ||||||||||| ||||| || || |||||||| ||||| Sbjct 6126 CTTCGACCTCAAGAGTGATCGTCTTTCCGGTGAGCGTTTTGACGAAGATCTG 6177 Score = 125 bits (138), Expect = 2e-23 Identities = 145/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| | ||||| || ||||| | |||||||| |||||| Sbjct 5141 TCCTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCATCTTCCAGCTGTTTTCCGGCGAAG 5200 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || ||||| || |||||| |||||||| || ||||||||||| || |||||| Sbjct 5201 ATGAGGCGCTGCTGG---TCTGGGGGAATTCCTTCCTTGTCCTGGATTTTGGCCTTCACG 5257 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | |||| ||| || || || ||||| || || || || || ||||| Sbjct 5258 TTCTCAATGGTATCGGAACCTTCAACCTCAAGGGTGATGGTTTTTCCTGTGAGCGTCTTC 5317 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 5318 ACGAAGATCTGCAT 5331 Score = 91.5 bits (100), Expect = 3e-13 Identities = 105/140 (75%), Gaps = 6/140 (4%) Strand=Plus/Plus Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTC 288390 || || |||||||| ||||| ||| |||||| ||||| || || |||||||| || Sbjct 4981 CCAGCAAAGATCAGTCGCTGCTGA---TCTGGGGGAATTCCCTCCTTGTCCTGGATCTTG 5037 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || |||||||| || || | ||| ||| || || || ||||||||||| ||||| Sbjct 5038 GCCTTCACGTTCTCAATCGTGTCGGAGCCTTCGACCTCAAGAGTGATCGTCTTTCCGGTG 5097 Query 288451 AGAGTCTTGACGAATATCTG 288470 || || |||||||| ||||| Sbjct 5098 AGCGTTTTGACGAAGATCTG 5117 Score = 87.8 bits (96), Expect = 4e-12 Identities = 106/143 (74%), Gaps = 6/143 (4%) Strand=Plus/Plus Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTC 288390 || || |||||||| ||||| || |||||| |||||||| || |||||||| || Sbjct 5813 CCAGCAAAGATCAGGCGCTGCTGG---TCTGGGGGAATTCCTTCCTTGTCCTGGATCTTG 5869 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || |||||||| || || | || ||| || ||||| ||||||||||| || ||| Sbjct 5870 GCCTTCACGTTCTCAATCGTGTCAGAGCCTTCGACCTCGAGTGTGATCGTCTTGCCAGTC 5929 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 | ||||| || || |||||||| Sbjct 5930 AAGGTCTTCACAAAGATCTGCAT 5952 Score = 84.2 bits (92), Expect = 5e-11 Identities = 111/153 (73%), Gaps = 6/153 (4%) Strand=Plus/Plus Query 288300 GTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGA 288359 ||||| | ||| || || || || | ||| ||||| ||||| ||||| ||||| ||| Sbjct 5594 GTCGGACAACGTACGACCATCCTCGAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGA-- 5651 Query 288360 ATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCT 288416 ||||| |||||||| || |||||||| || ||||||||||| || || | |||| Sbjct 5652 -TCTGGAGGAATTCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCAATGGTATCGGA 5710 Query 288417 CGATTCTACTTCGAGCGTGATCGTCTTCCCGGT 288449 ||| || || || ||||| || || || || Sbjct 5711 ACCTTCAACCTCAAGGGTGATGGTTTTTCCTGT 5743 >seq311 Length=48857 Score = 120 bits (132), Expect = 7e-22 Identities = 139/186 (75%), Gaps = 6/186 (3%) Strand=Plus/Minus Query 288292 ATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGC 288351 || || |||||| ||| || || |||||||| | || ||||| |||||||||| ||| Sbjct 16787 ATGTTGTAGTCGTTGAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAGCGC 16728 Query 288352 TGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATA 288408 || ||| ||||| || || || ||||||||||| || || |||||||| || || Sbjct 16727 TGCTGA---TCTGGAGGAATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATG 16671 Query 288409 GAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATC 288468 || | ||| |||||||| || || ||||||||||| || ||||| ||||| ||| Sbjct 16670 CTGTCAGAAGCTTCGACTTCGAGGGTAATGGTCTTCCCGGTGAGGGTCTTCACGAAGATC 16611 Query 288469 TGCATT 288474 |||||| Sbjct 16610 TGCATT 16605 Score = 98.7 bits (108), Expect = 2e-15 Identities = 104/136 (76%), Gaps = 6/136 (4%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | ||||||||||||| || ||| || ||||| || ||||||| Sbjct 17163 TCCACCACGGAGGCGGAGTACGAGATGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGA 17104 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363 ||| || || |||||||| | || ||||| |||||||||| |||||| || |||| Sbjct 17103 GAGAGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTG---ATCTGG 17047 Query 288364 -GGGATTCCTTCTTTA 288378 || |||||||| ||| Sbjct 17046 AGGAATTCCTTCCTTA 17031 >seq4684 Length=226209 Score = 93.3 bits (102), Expect = 1e-13 Identities = 107/143 (75%), Gaps = 6/143 (4%) Strand=Plus/Plus Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTC 288390 || ||||| ||||| |||||||| |||||| |||||||| || || ||||| || Sbjct 8835 CCGGCGAAAATCAGTCGCTGTTGG---TCTGGGGGAATTCCTTCCTTGTCTTGGATCTTG 8891 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || || || ||||| || | ||| | || || ||||| || || ||||| || ||| Sbjct 8892 GCCTTGACATTTTCAATGGTGTCGGAGGCCTCAACCTCGAGGGTAATGGTCTTGCCAGTC 8951 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 | |||||||||||| |||||||| Sbjct 8952 AAAGTCTTGACGAAAATCTGCAT 8974 >seq3387 Length=880 Score = 87.8 bits (96), Expect = 4e-12 Identities = 109/148 (74%), Gaps = 6/148 (4%) Strand=Plus/Minus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || |||||||| || || || ||| | ||| || || || || |||||||| || Sbjct 704 TTACCGGCGAAGATAAGGCGTTGCTGATCAGGTGGAATGCCCTCCTTGTCCTGGATCTTG 645 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGAT---TCTACTTCGAGCGTGATCGTCTTCCCG 288447 || ||||| || || || | || |||| || || ||||| ||||||||||| || Sbjct 644 GCCTTCACATTCTCAATGGTGTC---CGATCCCTCCACCTCGAGGGTGATCGTCTTACCC 588 Query 288448 GTCAGAGTCTTGACGAATATCTGCATTA 288475 || || || |||||||| |||||||||| Sbjct 587 GTGAGGGTTTTGACGAAAATCTGCATTA 560 >seq3195 Length=29224 Score = 87.8 bits (96), Expect = 4e-12 Identities = 109/148 (74%), Gaps = 6/148 (4%) Strand=Plus/Plus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATT 288387 || || ||||||||||| ||||| || |||||| || ||||| || |||||||| Sbjct 25026 TTACCGGCGAAGATCAGGCGCTGCTG---GTCTGGGGGAATGCCTTCCTTGTCCTGGATC 25082 Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447 || ||||| || || || |||| || | || || ||||| || || ||||| || Sbjct 25083 TTGGCTTTGACATTCTCGATAGTGTCCGAAGCCTCGACCTCGAGGGTAATTGTCTTACCC 25142 Query 288448 GTCAGAGTCTTGACGAATATCTGCATTA 288475 || || || |||||||| |||||||||| Sbjct 25143 GTTAGGGTTTTGACGAAAATCTGCATTA 25170 >seq3649 Length=5325 Score = 86.0 bits (94), Expect = 1e-11 Identities = 131/184 (71%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 72416 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 72475 ||| || || |||| || |||||||||||||| |||||| | || |||| |||| || Sbjct 2532 CCAGGCTTCCACGTCCGAATTGTATGGAAAAGTTCAAGAAGTCCCGCAGAAAGAAACCAC 2473 Query 72476 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 72535 ||||| ||||| || || |||| || || ||| | |||| || |||||| Sbjct 2472 CCCGTTCTATCCGCGTTCTCCCTACGCGGTCGCGAAGCTATACGGCTACTGGATCGTGGT 2413 Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGT-TTCAATCACGAGA 72594 || ||||| ||| | || ||||||| | ||||| | || | | ||||| ||||||| Sbjct 2412 TAACTACCGCGAGGCCTACAACATGTTCGCCTGCAA-TGGAATCCTCTTCAACCACGAGA 2354 Query 72595 GTCC 72598 |||| Sbjct 2353 GTCC 2350 >seq3368 Length=489 Score = 84.2 bits (92), Expect = 5e-11 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | |||||||||||| | || ||| || |||||||| ||||||| Sbjct 439 TCCACCACGGAGACGAAGTACGAGATGGAGGGTCGATTCCTTCTGGATATTGTAGTCGGA 380 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 ||| ||||| |||||||| | ||| |||||| Sbjct 379 GAGGGTGCGACCGTCTTCGAGTTGCTTTCCT 349 >seq1821 Length=3227 Score = 84.2 bits (92), Expect = 5e-11 Identities = 160/233 (69%), Gaps = 6/233 (3%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | ||| || ||||||| || || || ||||| || ||||| || Sbjct 1598 TCCACCACGCAGACGAAGGACCAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGC 1657 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| || || |||| ||| || || ||||||| || || | || || || Sbjct 1658 AAGAGTGCGGCCATCCTCTAGTTGCTTCCCGGCGAAGACGAGGCGTCGCTGG---TCAGG 1714 Query 288366 -GA--TTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 || | || | || |||||||||| || ||||||||||| | || | || Sbjct 1715 CGAAGTGCCAACCTTGCCCTGGATTTTGGCCTTCACGTTTTCGGCGGTGTCCGAAGCCTC 1774 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTA 288475 || |||| | | ||||| || |||| ||| |||||||| |||||||||| Sbjct 1775 CACCTCGACGAGGCTGGTCTTGCCAGTCAAAGTTTTGACGAAAATCTGCATTA 1827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179566223045452