Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24]
5,834 sequences; 82,504,363 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq871 161 2e-34
seq5007 159 8e-34
seq4364 156 1e-32
seq616 150 4e-31
seq611 136 9e-27
seq311 120 7e-22
seq4684 93.3 1e-13
seq3387 87.8 4e-12
seq3195 87.8 4e-12
seq3649 86.0 1e-11
seq3368 84.2 5e-11
seq1821 84.2 5e-11
>seq871
Length=2590
Score = 161 bits (178), Expect = 2e-34
Identities = 173/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| ||||| | || |||||||| | || ||| |||||||| || ||||||
Sbjct 726 TCCACCACGGAGACGGAGCACGAGATGCAAAGTCGATTCCTTTTGGATGTTGTAGTCGTT 667
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
||| || || |||||||| | || ||||| |||||||||| |||||| ||| | ||
Sbjct 666 GAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTGATCAGGGGG 607
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| |||||||| |||||||| ||||| || ||||| || || || ||| ||
Sbjct 606 AATACCTTCTTTGTCCTGGATCTTCGCCTTTACGTTCTCGATGCTGTCAGAACCTTCCAC 547
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
||| || ||||||||||||||||| || ||||| ||||| |||||||||
Sbjct 546 TTCCAGGGTGATCGTCTTCCCGGTGAGGGTCTTCACGAAGATCTGCATT 498
>seq5007
Length=89527
Score = 159 bits (176), Expect = 8e-34
Identities = 178/235 (76%), Gaps = 7/235 (3%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || ||||| || | ||| |||||||| | || ||||| ||||| || ||||
Sbjct 22256 CATG-CCTCCGCGCAGACGAAGGACGAGATGGAGGGTCGACTCTTTCTGGATGTTGTAGT 22314
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| ||||||||||||||| || | ||| ||||| |||||||| || ||||| || |
Sbjct 22315 CGGAGAGCGTGCGTCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTG---GT 22371
Query 288362 CT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
|| ||||| ||||| || || ||||| || || |||||||| || || | ||||
Sbjct 22372 CTGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAGC 22431
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||| || |||||||||||||||||||| || || || || || || ||||||||
Sbjct 22432 CTTCGACCTCGAGCGTGATCGTCTTCCCTGTGAGGGTTTTCACAAAGATCTGCAT 22486
Score = 149 bits (164), Expect = 1e-30
Identities = 174/234 (74%), Gaps = 6/234 (3%)
Strand=Plus/Plus
Query 288243 ATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTC 288302
|| ||| || || || | ||| |||||||| | || ||||| || || || |||||
Sbjct 22028 ATTTCCCCCACGCAGACGAAGGACGAGATGGAGGGTCGACTCTTTCTGAATGTTGTAGTC 22087
Query 288303 GGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATC 288362
|| ||||||||||||||| || | ||| ||||| |||||||| || ||||| || ||
Sbjct 22088 GGAGAGCGTGCGTCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGGCGCTGCTG---GTC 22144
Query 288363 T---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA 288419
| ||||| ||||| || || ||||| || || |||||||| || || | ||||
Sbjct 22145 TGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCGATGGTATCGGAGCC 22204
Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || |||||||||||||||||||| || || || || || || ||||||||
Sbjct 22205 CTCAACCTCGAGCGTGATCGTCTTCCCTGTGAGGGTTTTCACAAAGATCTGCAT 22258
>seq4364
Length=177085
Score = 156 bits (172), Expect = 1e-32
Identities = 177/235 (75%), Gaps = 12/235 (5%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
||||||||| |||| ||||||||||| | || ||| || ||||| || || ||||
Sbjct 156919 TCCACCGCGAAGTCGGAGTACGAGATGGAGGGTCGATTCCTTCTGGATGTTGTAATCGGA 156978
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363
||| ||||| |||||||| | || ||||| |||||||||| |||||| || ||||
Sbjct 156979 GAGAGTGCGACCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTG---ATCTGG 157035
Query 288364 -GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGA--- 288419
|| || |||||||| || ||||| || || |||||||| || || | || |||
Sbjct 157036 AGGAATGCCTTCTTTGTCTTGGATCTTGGCCTTCACGTTCTCAATGGTGTC---CGAACC 157092
Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
|| ||||| || ||||||||||| || || || ||||| ||||| |||||||||
Sbjct 157093 CTCGACTTCCAGGGTGATCGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATT 157147
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| ||||| | ||||||||||| | || ||| || ||||| || |||||||
Sbjct 156658 TCCACCACGGAGACGGAGTACGAGATGGAGAGTCGATTCCTTCTGGATGTTGTAGTCGGA 156717
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACG 288350
||| ||||| |||||||| | || ||||| |||||||||| |||
Sbjct 156718 GAGGGTGCGACCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACG 156762
>seq616
Length=1528
Score = 150 bits (166), Expect = 4e-31
Identities = 176/235 (75%), Gaps = 7/235 (3%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || ||||| || | ||| ||||| || | || ||| || |||||||| ||||
Sbjct 869 CATG-CCTCCGCGAAGCCGAAGGACGAGGTGGAGGGTCGATTCCTTCTGGATATTGTAGT 927
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| ||| ||||| || ||||| | || ||||| |||||||||| ||||| || |
Sbjct 928 CGGAGAGGGTGCGACCATCTTCCAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGG---T 984
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
||||| |||||||||||||||||||| || || |||||||| || || | |||
Sbjct 985 CTGGGGGAATTCCTTCTTTATCCTGGATCTTGGCCTTCACGTTCTCAATCGTGTCGGAGC 1044
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||| ||||| || ||||| ||||| || |||| ||||| || || ||||||||
Sbjct 1045 CTTCCACTTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACAAAGATCTGCAT 1099
Score = 141 bits (156), Expect = 2e-28
Identities = 177/239 (74%), Gaps = 13/239 (5%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || |||||||||| || |||||||| | ||| |||||| ||||| || ||||
Sbjct 363 CATG-CCTCCGCGGAGTCGGAGGACGAGATGGAGGGTGGATTCTTTCTGGATGTTGTAGT 421
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
| | || ||||| || || || | || ||||| ||||| || || ||||| || |
Sbjct 422 CCGAAAGGGTGCGGCCATCCTCAAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGG---T 478
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
||||| |||||||| || || ||||| || || |||||||| || || | || ||
Sbjct 479 CTGGGGGGATTCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCGATGGTGTC---CG 535
Query 288419 A---TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
| ||| ||||| | ||||||||||| ||||| || || |||||||| |||||||||
Sbjct 536 AGCCTTCCACTTCCAAGGTGATCGTCTTGCCGGTGAGCGTTTTGACGAAGATCTGCATT 594
Score = 131 bits (144), Expect = 4e-25
Identities = 174/238 (73%), Gaps = 13/238 (5%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || |||||||| | ||| |||||||| | || ||| || ||||| || ||||
Sbjct 135 CATG-CCTCCGCGGAGCCGAAGGACGAGATGGAGGGTCGATTCCTTCTGGATGTTGTAGT 193
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| | ||||| || || || | || ||||| ||||| || || ||||| || |
Sbjct 194 CGGACAAAGTGCGACCATCCTCGAGCTGCTTTCCGGCGAAAATGAGGCGCTGCTGG---T 250
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GC 288415
||||| ||||||||||| |||||||| || ||||| || ||||| || | ||| ||
Sbjct 251 CTGGGGGAATTCCTTCTTTGTCCTGGATCTTGGCTTTGACATTTTCGATGGTATCAGAGC 310
Query 288416 TCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
| || || || || || |||||||| || || || ||||| ||||| ||||||||
Sbjct 311 CC---TCGACCTCCAGGGTAATCGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 365
Score = 114 bits (126), Expect = 3e-20
Identities = 168/235 (71%), Gaps = 7/235 (3%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || ||||| || | ||| |||||||| | || || || || || || ||||
Sbjct 1097 CATG-CCTCCGCGAAGCCGAAGGACGAGATGGAGGGTTGACTCCTTCTGAATGTTGTAGT 1155
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| | ||||| || || || | || ||||| |||||||||| ||||| || |
Sbjct 1156 CGGACAAAGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATCAATCGCTGCTGG---T 1212
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
|||| |||||||| || || ||||| || ||||| || || || || | ||
Sbjct 1213 CTGGAGGAATTCCTTCCTTGTCTTGGATCTTGGCTTTGACATTCTCGATGGTGTCAGAGC 1272
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||| ||||| || || |||||||| ||||| || ||||||||||| ||||||||
Sbjct 1273 CTTCAACTTCAAGAGTAATCGTCTTTCCGGTGAGCGTCTTGACGAAGATCTGCAT 1327
Score = 91.5 bits (100), Expect = 3e-13
Identities = 105/140 (75%), Gaps = 6/140 (4%)
Strand=Plus/Plus
Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT 288393
||||| || || ||||| || |||||| ||||||||||| |||||||| || ||
Sbjct 1 GCGAAAATGAGGCGCTGCTGG---TCTGGGGGAATTCCTTCTTTGTCCTGGATCTTGGCC 57
Query 288394 TTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453
|||||||| || || | ||| ||| ||||| || ||||||||||| || ||||
Sbjct 58 TTCACGTTCTCAATCGTGTCGGATCCTTCCACTTCCAGTGTGATCGTCTTGCCAGTCAAG 117
Query 288454 GTCTTGACGAATATCTGCAT 288473
||||| || || ||||||||
Sbjct 118 GTCTTCACAAAGATCTGCAT 137
>seq611
Length=17302
Score = 136 bits (150), Expect = 9e-27
Identities = 175/236 (74%), Gaps = 9/236 (4%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| ||||| ||||||| || || ||||| | || || || ||||| || ||||
Sbjct 4616 CATG-CCACCACGGAGTCGGAGGACAAGATGGAGAGTCGACTCCTTCTGGATGTTGTAGT 4674
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| ||| ||||| || ||||| | || ||||| ||||| |||| ||||| || |
Sbjct 4675 CGGAGAGGGTGCGACCATCTTCCAGCTGCTTTCCAGCGAAAATCAATCGCTGCTGG---T 4731
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC-GCTC 288417
||||| |||||||| || || ||||| || || |||||||| || || | || | ||
Sbjct 4732 CTGGGGGAATTCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCGATGGTGTCCGATC 4791
Query 288418 GATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||| || ||||| ||||||||||| || |||| ||||| ||||| ||||||||
Sbjct 4792 C-TTCGACCTCGAGTGTGATCGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 4846
Score = 132 bits (146), Expect = 1e-25
Identities = 170/232 (73%), Gaps = 7/232 (3%)
Strand=Plus/Plus
Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301
|||| || |||||||| | ||| || || || | ||| |||||| ||||| || ||||
Sbjct 5950 CATG-CCTCCGCGGAGCCGAAGGACCAGGTGGAGGGTGGATTCTTTCTGGATGTTGTAGT 6008
Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361
||| | ||||| || || || | || || || ||||| ||||| ||||| || |
Sbjct 6009 CGGACAAAGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAAATCAGGCGCTGCTGG---T 6065
Query 288362 CTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418
||||| |||||||| ||||| |||||||| || |||||||| || || | ||
Sbjct 6066 CTGGGGGAATTCCTTCCTTATCTTGGATTTTGGCCTTCACGTTCTCAATCGTGTCAGAGC 6125
Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTG 288470
||| || || || ||||||||||| ||||| || || |||||||| |||||
Sbjct 6126 CTTCGACCTCAAGAGTGATCGTCTTTCCGGTGAGCGTTTTGACGAAGATCTG 6177
Score = 125 bits (138), Expect = 2e-23
Identities = 145/194 (75%), Gaps = 6/194 (3%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| | ||||| || ||||| | |||||||| ||||||
Sbjct 5141 TCCTTCTGGATGTTGTAGTCGGACAAAGTGCGGCCATCTTCCAGCTGTTTTCCGGCGAAG 5200
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| || ||||| || |||||| |||||||| || ||||||||||| || ||||||
Sbjct 5201 ATGAGGCGCTGCTGG---TCTGGGGGAATTCCTTCCTTGTCCTGGATTTTGGCCTTCACG 5257
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || || | |||| ||| || || || ||||| || || || || || |||||
Sbjct 5258 TTCTCAATGGTATCGGAACCTTCAACCTCAAGGGTGATGGTTTTTCCTGTGAGCGTCTTC 5317
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 5318 ACGAAGATCTGCAT 5331
Score = 91.5 bits (100), Expect = 3e-13
Identities = 105/140 (75%), Gaps = 6/140 (4%)
Strand=Plus/Plus
Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTC 288390
|| || |||||||| ||||| ||| |||||| ||||| || || |||||||| ||
Sbjct 4981 CCAGCAAAGATCAGTCGCTGCTGA---TCTGGGGGAATTCCCTCCTTGTCCTGGATCTTG 5037
Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450
|| |||||||| || || | ||| ||| || || || ||||||||||| |||||
Sbjct 5038 GCCTTCACGTTCTCAATCGTGTCGGAGCCTTCGACCTCAAGAGTGATCGTCTTTCCGGTG 5097
Query 288451 AGAGTCTTGACGAATATCTG 288470
|| || |||||||| |||||
Sbjct 5098 AGCGTTTTGACGAAGATCTG 5117
Score = 87.8 bits (96), Expect = 4e-12
Identities = 106/143 (74%), Gaps = 6/143 (4%)
Strand=Plus/Plus
Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTC 288390
|| || |||||||| ||||| || |||||| |||||||| || |||||||| ||
Sbjct 5813 CCAGCAAAGATCAGGCGCTGCTGG---TCTGGGGGAATTCCTTCCTTGTCCTGGATCTTG 5869
Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450
|| |||||||| || || | || ||| || ||||| ||||||||||| || |||
Sbjct 5870 GCCTTCACGTTCTCAATCGTGTCAGAGCCTTCGACCTCGAGTGTGATCGTCTTGCCAGTC 5929
Query 288451 AGAGTCTTGACGAATATCTGCAT 288473
| ||||| || || ||||||||
Sbjct 5930 AAGGTCTTCACAAAGATCTGCAT 5952
Score = 84.2 bits (92), Expect = 5e-11
Identities = 111/153 (73%), Gaps = 6/153 (4%)
Strand=Plus/Plus
Query 288300 GTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGA 288359
||||| | ||| || || || || | ||| ||||| ||||| ||||| ||||| |||
Sbjct 5594 GTCGGACAACGTACGACCATCCTCGAGTTGCTTTCCGGCGAAAATCAGGCGCTGCTGA-- 5651
Query 288360 ATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCT 288416
||||| |||||||| || |||||||| || ||||||||||| || || | ||||
Sbjct 5652 -TCTGGAGGAATTCCTTCCTTGTCCTGGATCTTGGCTTTCACGTTCTCAATGGTATCGGA 5710
Query 288417 CGATTCTACTTCGAGCGTGATCGTCTTCCCGGT 288449
||| || || || ||||| || || || ||
Sbjct 5711 ACCTTCAACCTCAAGGGTGATGGTTTTTCCTGT 5743
>seq311
Length=48857
Score = 120 bits (132), Expect = 7e-22
Identities = 139/186 (75%), Gaps = 6/186 (3%)
Strand=Plus/Minus
Query 288292 ATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGC 288351
|| || |||||| ||| || || |||||||| | || ||||| |||||||||| |||
Sbjct 16787 ATGTTGTAGTCGTTGAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAGCGC 16728
Query 288352 TGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATA 288408
|| ||| ||||| || || || ||||||||||| || || |||||||| || ||
Sbjct 16727 TGCTGA---TCTGGAGGAATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGATG 16671
Query 288409 GAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATC 288468
|| | ||| |||||||| || || ||||||||||| || ||||| ||||| |||
Sbjct 16670 CTGTCAGAAGCTTCGACTTCGAGGGTAATGGTCTTCCCGGTGAGGGTCTTCACGAAGATC 16611
Query 288469 TGCATT 288474
||||||
Sbjct 16610 TGCATT 16605
Score = 98.7 bits (108), Expect = 2e-15
Identities = 104/136 (76%), Gaps = 6/136 (4%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| ||||| | ||||||||||||| || ||| || ||||| || |||||||
Sbjct 17163 TCCACCACGGAGGCGGAGTACGAGATGAAGGGTCGATTCCTTCTGGATGTTGTAGTCGGA 17104
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT-- 288363
||| || || |||||||| | || ||||| |||||||||| |||||| || ||||
Sbjct 17103 GAGAGTTCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAAACGCTGCTG---ATCTGG 17047
Query 288364 -GGGATTCCTTCTTTA 288378
|| |||||||| |||
Sbjct 17046 AGGAATTCCTTCCTTA 17031
>seq4684
Length=226209
Score = 93.3 bits (102), Expect = 1e-13
Identities = 107/143 (75%), Gaps = 6/143 (4%)
Strand=Plus/Plus
Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTC 288390
|| ||||| ||||| |||||||| |||||| |||||||| || || ||||| ||
Sbjct 8835 CCGGCGAAAATCAGTCGCTGTTGG---TCTGGGGGAATTCCTTCCTTGTCTTGGATCTTG 8891
Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450
|| || || ||||| || | ||| | || || ||||| || || ||||| || |||
Sbjct 8892 GCCTTGACATTTTCAATGGTGTCGGAGGCCTCAACCTCGAGGGTAATGGTCTTGCCAGTC 8951
Query 288451 AGAGTCTTGACGAATATCTGCAT 288473
| |||||||||||| ||||||||
Sbjct 8952 AAAGTCTTGACGAAAATCTGCAT 8974
>seq3387
Length=880
Score = 87.8 bits (96), Expect = 4e-12
Identities = 109/148 (74%), Gaps = 6/148 (4%)
Strand=Plus/Minus
Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390
|| || |||||||| || || || ||| | ||| || || || || |||||||| ||
Sbjct 704 TTACCGGCGAAGATAAGGCGTTGCTGATCAGGTGGAATGCCCTCCTTGTCCTGGATCTTG 645
Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGAT---TCTACTTCGAGCGTGATCGTCTTCCCG 288447
|| ||||| || || || | || |||| || || ||||| ||||||||||| ||
Sbjct 644 GCCTTCACATTCTCAATGGTGTC---CGATCCCTCCACCTCGAGGGTGATCGTCTTACCC 588
Query 288448 GTCAGAGTCTTGACGAATATCTGCATTA 288475
|| || || |||||||| ||||||||||
Sbjct 587 GTGAGGGTTTTGACGAAAATCTGCATTA 560
>seq3195
Length=29224
Score = 87.8 bits (96), Expect = 4e-12
Identities = 109/148 (74%), Gaps = 6/148 (4%)
Strand=Plus/Plus
Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATT 288387
|| || ||||||||||| ||||| || |||||| || ||||| || ||||||||
Sbjct 25026 TTACCGGCGAAGATCAGGCGCTGCTG---GTCTGGGGGAATGCCTTCCTTGTCCTGGATC 25082
Query 288388 TTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCG 288447
|| ||||| || || || |||| || | || || ||||| || || ||||| ||
Sbjct 25083 TTGGCTTTGACATTCTCGATAGTGTCCGAAGCCTCGACCTCGAGGGTAATTGTCTTACCC 25142
Query 288448 GTCAGAGTCTTGACGAATATCTGCATTA 288475
|| || || |||||||| ||||||||||
Sbjct 25143 GTTAGGGTTTTGACGAAAATCTGCATTA 25170
>seq3649
Length=5325
Score = 86.0 bits (94), Expect = 1e-11
Identities = 131/184 (71%), Gaps = 2/184 (1%)
Strand=Plus/Minus
Query 72416 CCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATAC 72475
||| || || |||| || |||||||||||||| |||||| | || |||| |||| ||
Sbjct 2532 CCAGGCTTCCACGTCCGAATTGTATGGAAAAGTTCAAGAAGTCCCGCAGAAAGAAACCAC 2473
Query 72476 TCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAA 72535
||||| ||||| || || |||| || || ||| | |||| || ||||||
Sbjct 2472 CCCGTTCTATCCGCGTTCTCCCTACGCGGTCGCGAAGCTATACGGCTACTGGATCGTGGT 2413
Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGT-TTCAATCACGAGA 72594
|| ||||| ||| | || ||||||| | ||||| | || | | ||||| |||||||
Sbjct 2412 TAACTACCGCGAGGCCTACAACATGTTCGCCTGCAA-TGGAATCCTCTTCAACCACGAGA 2354
Query 72595 GTCC 72598
||||
Sbjct 2353 GTCC 2350
>seq3368
Length=489
Score = 84.2 bits (92), Expect = 5e-11
Identities = 73/91 (80%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| ||||| | |||||||||||| | || ||| || |||||||| |||||||
Sbjct 439 TCCACCACGGAGACGAAGTACGAGATGGAGGGTCGATTCCTTCTGGATATTGTAGTCGGA 380
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336
||| ||||| |||||||| | ||| ||||||
Sbjct 379 GAGGGTGCGACCGTCTTCGAGTTGCTTTCCT 349
>seq1821
Length=3227
Score = 84.2 bits (92), Expect = 5e-11
Identities = 160/233 (69%), Gaps = 6/233 (3%)
Strand=Plus/Plus
Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305
|||||| || || | ||| || ||||||| || || || ||||| || ||||| ||
Sbjct 1598 TCCACCACGCAGACGAAGGACCAGATGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGC 1657
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
|| ||||| || || |||| ||| || || ||||||| || || | || || ||
Sbjct 1658 AAGAGTGCGGCCATCCTCTAGTTGCTTCCCGGCGAAGACGAGGCGTCGCTGG---TCAGG 1714
Query 288366 -GA--TTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422
|| | || | || |||||||||| || ||||||||||| | || | ||
Sbjct 1715 CGAAGTGCCAACCTTGCCCTGGATTTTGGCCTTCACGTTTTCGGCGGTGTCCGAAGCCTC 1774
Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTA 288475
|| |||| | | ||||| || |||| ||| |||||||| ||||||||||
Sbjct 1775 CACCTCGACGAGGCTGGTCTTGCCAGTCAAAGTTTTGACGAAAATCTGCATTA 1827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179566223045452
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |