Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Steinernema_20feltiae_20[genbank_20GCA_5F000757705.1_202014-09-24] 5,834 sequences; 82,504,363 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq5716 111 2e-19 seq5071 82.4 9e-11 >seq5716 Length=132174 Score = 111 bits (122), Expect = 2e-19 Identities = 446/701 (64%), Gaps = 21/701 (3%) Strand=Plus/Minus Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 || || |||| |||||| ||||| | | | |||||||| || | |||||| ||||| || Sbjct 122653 TAAATGTTGGACGTGTACGGCTCGATGGATTCATTGTTTCCAAGGATTTGAGCGGTTGAT 122594 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || || ||||| || || | || || ||||| || | || | | | || || Sbjct 122593 GCGGTCGGCATCGGGGCAAGAAGCAGACTGTTGCGTACCCCGTGCTTCGCGATTTTCTCT 122534 Query 114062 TTGAGGGCGTCCCAGTC----------GTAGTT--GA--GCTTTGTCTCCCCCTG----C 114103 ||||| | ||||||| |||| || | |||| | | ||| | Sbjct 122533 TTGAGAGATGCCCAGTCACACTGATCTGTAGGGACGACTGGTTTGCCGTCTTCTGTTTGC 122474 Query 114104 CACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGG 114163 ||||| ||| |||| || || |||||| |||| || |||||| | || ||||| || Sbjct 122473 CACATTTCATACTGCAGAATTCCTTGGCTCACTGGAGACCCCTCATAGGTTTCGTAAGGA 122414 Query 114164 CCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAA 114223 || | ||| || | |||| | ||| || || ||||||| || ||||| ||||| Sbjct 122413 CCATATTTCTCAGCAAGTTCGCATGACGCTTCCAGAGCTGCGTAGTAAATTGTTTCAAAG 122354 Query 114224 ATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAAT 114283 || || |||| | |||| | |||| | | || | || || Sbjct 122353 ATTCGCTTGTTCACATCTCGAGCCTGAGGGCTGGTGAACGGGTGGCGCATTAGCATGAAG 122294 Query 114284 ACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGA 114343 |||| || | ||| || || |||| || ||||||||||| | | | ||||| || | Sbjct 122293 GCATCAGCCAAACCCTGAACTCCGATTCCTATTGGGCGATGACGCTTGTTAGAGGTTTCA 122234 Query 114344 GCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACC 114403 || | | ||||| | || | || || | | || | ||| |||| ||| Sbjct 122233 GCTTCCGGTATAGGATAGTAGTTGCAGTCAATTATTTTGTTCAAATTGCGTGTGATGACC 122174 Query 114404 TTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTA 114463 || || || || ||||||||||| || || || | | || || || ||| | | Sbjct 122173 TTGGTAATCTCGTGAAGCTTTTCATAGTCGAA---GGTCTTGTCATCCTTCACAAATCTG 122117 Query 114464 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 114523 | |||| || |||||||| || |||| | ||||| | ||||| | Sbjct 122116 TTCAAAGCGACGGAGGCCAGATTGCAAACAGCGACTTCATCTGGGGACGAGTACTGCACT 122057 Query 114524 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 114583 ||||| || |||| |||||| | ||| || || ||||| ||||| || || |||||| Sbjct 122056 ATTTCGGTGCACAGATTTGAGCACTTGATCGTTCCCAAATTCTTCTGGTTAGACTTTCGA 121997 Query 114584 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTC 114624 || || ||||| |||||||||||||| || || || || || Sbjct 121996 TTGCATGCATCTTTGTAAAGCATGTAAGGAGTTCCGGTTTC 121956 >seq5071 Length=368534 Score = 82.4 bits (90), Expect = 9e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 126059 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCC 126118 || || || || || ||||| |||||||| || | | || || ||||||||||| Sbjct 135116 TGTAGGCCTTCATCCCGGGAAATGAGTTCGTTGCTGTGGGTGAGGCCAGGCATGAGACCA 135175 Query 126119 CGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACAC 126178 ||||| ||||||||||| || ||| || || || |||||||| || ||||||||| Sbjct 135176 CGCTTTTTCAACCAGAATATGGCAGCGAACGATCCTGAGAAGAAAATGCCCTCCACAGCA 135235 Query 126179 GCGAACGC 126186 ||||| || Sbjct 135236 GCGAAGGC 135243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597310037988720